FFCP PHASE1:Hg19::chr22:33410785..33410823,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11496 | |||
|TSSclassifier=strong | |||
|UniProt=Q4TT46 | |||
|association_with_transcript=-271bp_to_ENST00000412575_5end | |||
|cluster_id=chr22:33410785..33410823,- | |||
|coexpression_cluster_id=C3448 | |||
|description=CAGE_peak_5_at_SYN3_5end | |||
|id=chr22:33410785..33410823,- | |||
|ontology_enrichment_celltype=CL:0002541!6.32e-25!3;CL:0000039!3.90e-11!7;CL:0000586!3.90e-11!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.53e-15;7!CL:0000586;3.53e-15;7!CL:0002541;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.53e-15,7;CL:0000586,3.53e-15,7;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.83e-11;10!UBERON:0005564;5.83e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;4.07e-15;7!DOID:3904;4.07e-15;7!DOID:1324;1.44e-07;15!DOID:5409;1.49e-07;4!DOID:0050615;3.78e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.79e-15,7;DOID:3904,3.79e-15,7;DOID:1324,1.40e-07,15;DOID:5409,1.49e-07,4;DOID:0050615,3.66e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000476!6.32e-25!3;UBERON:0000920!6.32e-25!3;UBERON:0003124!8.36e-19!7;UBERON:0000473!7.85e-10!8;UBERON:0005631!1.70e-09!14;UBERON:0000158!1.70e-09!14;UBERON:0002902!3.00e-09!1;UBERON:0009899!3.00e-09!1;UBERON:0002581!3.83e-09!1;UBERON:0001950!4.39e-09!20;UBERON:0002022!5.72e-09!1;UBERON:0002619!2.80e-08!22;UBERON:0000956!2.64e-07!25;UBERON:0000203!2.64e-07!25;UBERON:0003135!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.88e-13;8!UBERON:0003135;4.73e-10;11!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.83e-13,8;UBERON:0003135,4.62e-10,11;UBERON:0000920,1.81e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,0,7.82261077838458,0.31900115973192,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87572372188031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0.250707539292375,2.72803313585662,6.69910325390446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SYN3 | |||
}} |
Latest revision as of 23:02, 19 September 2015
Short description: | p5@SYN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYN3_5end |
Coexpression cluster: | C3448_testis_choriocarcinoma_pancreatic_small_bronchogenic_chorionic_placenta |
Association with transcript: | -271bp_to_ENST00000412575_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | Q4TT46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.53e-15 | 7 |
germ cell | 3.53e-15 | 7 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.83e-13 | 8 |
male reproductive organ | 4.62e-10 | 11 |
egg chorion | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.79e-15 | 7 |
bronchogenic carcinoma | 3.79e-15 | 7 |
lung cancer | 1.40e-07 | 15 |
lung small cell carcinoma | 1.49e-07 | 4 |
respiratory system cancer | 3.66e-07 | 16 |