FFCP PHASE1:Hg19::chr1:948866..948885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9636 | |EntrezGene=9636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4053 | |HGNC=4053 | ||
|TSSclassifier=strong | |||
|UniProt=P05161 | |UniProt=P05161 | ||
|association_with_transcript=19bp_to_NM_005101,uc001acj.3_5end | |association_with_transcript=19bp_to_NM_005101,uc001acj.3_5end | ||
|cluster_id=chr1:948866..948885,+ | |||
|coexpression_cluster_id=C678 | |coexpression_cluster_id=C678 | ||
|description=CAGE_peak_1_at_ISG15_5end | |description=CAGE_peak_1_at_ISG15_5end | ||
|id=chr1:948866..948885,+ | |id=chr1:948866..948885,+ | ||
|ontology_enrichment_celltype=CL:0000003!1.61e-14!722;CL:0000548!1.37e-13!679;CL:0000004!1.37e-13!679;CL:0000255!1.37e-13!679;CL:0000012!1.40e-13!682;CL:0000063!4.56e-09!578;CL:0002057!5.24e-09!42;CL:0000359!1.21e-08!32;CL:0000222!1.35e-08!119;CL:0000192!1.69e-08!42;CL:0000514!1.69e-08!42;CL:0002371!2.72e-08!591;CL:0000860!3.84e-08!45;CL:0000144!1.41e-07!625;CL:0002087!6.36e-07!119 | |ontology_enrichment_celltype=CL:0000003!1.61e-14!722;CL:0000548!1.37e-13!679;CL:0000004!1.37e-13!679;CL:0000255!1.37e-13!679;CL:0000012!1.40e-13!682;CL:0000063!4.56e-09!578;CL:0002057!5.24e-09!42;CL:0000359!1.21e-08!32;CL:0000222!1.35e-08!119;CL:0000192!1.69e-08!42;CL:0000514!1.69e-08!42;CL:0002371!2.72e-08!591;CL:0000860!3.84e-08!45;CL:0000144!1.41e-07!625;CL:0002087!6.36e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.12e-08;32!CL:0000860;7.41e-07;33!CL:0002057;7.41e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-09,42;CL:0002057,5.24e-09,42;CL:0000473,7.20e-09,48;CL:0000234,7.20e-09,48;CL:0000359,1.21e-08,32;CL:0000222,1.72e-08,121;CL:0000192,6.25e-08,43;CL:0000514,6.25e-08,43;CL:0002087,2.86e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.94e-11!448;UBERON:0004120!1.94e-11!448;UBERON:0006603!1.94e-11!448;UBERON:0003081!2.12e-10!216;UBERON:0004535!6.90e-08!110;UBERON:0001009!2.18e-07!113;UBERON:0002204!3.23e-07!167;UBERON:0001737!6.75e-07!9;UBERON:0000055!7.77e-07!69 | |ontology_enrichment_uberon=UBERON:0000926!1.94e-11!448;UBERON:0004120!1.94e-11!448;UBERON:0006603!1.94e-11!448;UBERON:0003081!2.12e-10!216;UBERON:0004535!6.90e-08!110;UBERON:0001009!2.18e-07!113;UBERON:0002204!3.23e-07!167;UBERON:0001737!6.75e-07!9;UBERON:0000055!7.77e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.73e-07;9!UBERON:0001557;6.73e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.85e-11,203;UBERON:0000926,5.82e-09,315;UBERON:0004120,5.82e-09,315;UBERON:0006603,5.82e-09,315;UBERON:0004535,6.90e-08,109;UBERON:0001009,2.20e-07,112;UBERON:0002193,6.29e-07,108;UBERON:0001737,6.75e-07,9;UBERON:0000055,7.51e-07,68 | |||
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| ||
|short_description=p1@ISG15 | |short_description=p1@ISG15 | ||
}} | }} |
Latest revision as of 23:01, 19 September 2015
Short description: | p1@ISG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ISG15_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | 19bp_to_NM_005101, uc001acj.3_5end |
EntrezGene: | ISG15 |
HGNC: | 4053 |
UniProt: | P05161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-09 | 42 |
defensive cell | 7.20e-09 | 48 |
phagocyte | 7.20e-09 | 48 |
vascular associated smooth muscle cell | 1.21e-08 | 32 |
mesodermal cell | 1.72e-08 | 121 |
smooth muscle cell | 6.25e-08 | 43 |
smooth muscle myoblast | 6.25e-08 | 43 |
nongranular leukocyte | 2.86e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.85e-11 | 203 |
mesoderm | 5.82e-09 | 315 |
mesoderm-derived structure | 5.82e-09 | 315 |
presumptive mesoderm | 5.82e-09 | 315 |
cardiovascular system | 6.90e-08 | 109 |
circulatory system | 2.20e-07 | 112 |
hemolymphoid system | 6.29e-07 | 108 |
larynx | 6.75e-07 | 9 |
vessel | 7.51e-07 | 68 |