FFCP PHASE1:Hg19::chr18:5544248..5544259,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:5544248..5544259,- to FFCP PHASE1:Hg19::chr18:5544248..5544259,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23136 | |EntrezGene=23136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |HGNC=3380 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2J2 | |UniProt=Q9Y2J2 | ||
|association_with_transcript=-7bp_to_ENST00000341928_5end | |||
|cluster_id=chr18:5544248..5544259,- | |||
|description=CAGE_peak_8_at_EPB41L3_5end | |||
|id=chr18:5544248..5544259,- | |||
|ontology_enrichment_celltype=CL:0002057!2.62e-18!42;CL:0002009!3.95e-17!65;CL:0002194!5.14e-17!63;CL:0000576!5.14e-17!63;CL:0000040!5.14e-17!63;CL:0000559!5.14e-17!63;CL:0000860!3.73e-16!45;CL:0000557!2.86e-14!71;CL:0000839!1.10e-13!70;CL:0000766!3.15e-12!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.96e-19;33!CL:0002057;6.96e-19;33!CL:0000473;6.00e-18;39!CL:0000234;6.00e-18;39!CL:0000708;1.84e-12;3!CL:0000576;8.48e-12;48!CL:0000766;9.02e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.27e-20,48;CL:0000234,5.27e-20,48;CL:0002194,1.69e-19,59;CL:0000576,1.69e-19,59;CL:0000040,1.69e-19,59;CL:0000559,1.69e-19,59;CL:0002009,1.02e-18,61;CL:0000839,5.59e-17,66;CL:0000557,1.16e-16,67;CL:0000860,1.06e-15,42;CL:0002057,1.06e-15,42;CL:0000766,3.30e-15,72;CL:0000708,4.71e-12,3;CL:0000763,8.17e-10,108;CL:0000049,8.17e-10,108;CL:0002087,5.92e-08,115;CL:0002031,1.87e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.84e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.68e-11!80;UBERON:0004765!1.68e-09!101;UBERON:0001434!1.68e-09!101;UBERON:0001474!4.01e-09!86;UBERON:0002405!9.78e-08!115;UBERON:0002193!1.40e-07!112;UBERON:0002390!2.28e-07!102;UBERON:0003061!2.28e-07!102;UBERON:0000467!5.20e-07!625;UBERON:0000468!5.35e-07!659;UBERON:0000480!6.49e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.84e-12;3!UBERON:0002784;3.44e-10;4!UBERON:0001905;7.13e-10;2!UBERON:0002757;7.13e-10;2!UBERON:0010134;7.13e-10;2!UBERON:0005408;7.13e-10;2!UBERON:0001899;7.13e-10;2!UBERON:0002360;7.17e-09;2!UBERON:0000094;7.17e-09;2!UBERON:0010743;7.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.50e-14,76;UBERON:0002405,1.28e-13,93;UBERON:0001474,7.82e-13,82;UBERON:0003210,4.71e-12,3;UBERON:0004765,2.58e-11,90;UBERON:0002390,2.72e-11,98;UBERON:0003061,2.72e-11,98;UBERON:0002193,4.57e-11,108;UBERON:0001434,5.17e-11,100;UBERON:0002784,2.03e-10,4;UBERON:0001905,7.22e-10,2;UBERON:0002757,7.22e-10,2;UBERON:0010134,7.22e-10,2;UBERON:0005408,7.22e-10,2;UBERON:0001899,7.22e-10,2;UBERON:0002360,1.94e-08,2;UBERON:0000094,1.94e-08,2;UBERON:0010743,1.94e-08,2 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0.940364164434263,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.895661896959697,1.29557466407592,1.80302897343931,0.290796477559129,0,0.242584061187816,1.16214518452842,1.6446715520873,0.929119112685311,1.1507695692886,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,1.35426486594342,1.12945403725563,1.63743690034707,0.898893937780338,2.14258724659632,1.60464513538047,1.27867425159808,0.659702600373432,1.59570926097305,0.852449501065388,0,1.13477044938228,1.86846674698672,1.50749199154046,0,0.65156653411535,0,1.47311054395026,0.316462387440884,0.633765858935825,0.212604299965044,0.419317291016752,0.22465726229299,0,0.48217676009124,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,0,0,0,1.33888245105868,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.535798369704479,0.673588117878509,0.225222960966644,0,2.84779697870439,0,0,0,0,0.496971951695318,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.809364721840658,0.561803226808994,0,0.491337269247072,0.206651562351531,0,0,0,0,0.841680569770331,0.375355559615893,0,0,0,0,0.340296549480063,0,0.427114777637135,0.211931901159562,0,0.309157587715317,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0.705264687593482,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,1.12131084345361,1.30788020649984,1.10007428731425,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.771048469013278,0.532685175939381,0.739144404124282,0.519254429183621,0.929683027679674,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.680374821106063,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.137836572484531,0.429680979473094,0,1.19317278382541,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,1.00899853595524,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,1.73624994933292,0,0,0,0.221158519862449,0,1.09692698576986,0,0,0,0.569710279235006,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,1.13735843331278,0.450970258243478,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.959293472527256,0.794858446811959,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,1.12527203925513,0.275078873194468,0,0.899895566206002,0,0.242998226632099,0,0.157611414598396,0.367182116944987,0.316801009558219,11.4743897173021,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0.52893040697076,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,1.08803560673895,0.7520696820681,0,0,0.314108192500469,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.372578417648301,0.415045904808692,0,0.303298235083296,0.570930667089935,0,0.468334905806882,0,0.149254802886874,0.701139929541673,1.10961172300523,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.443565449968902,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.57785949122191,0.643324774124777,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,2.07258205038719,0,0,0,0,0.327130788511688,0,0,0,0,0.320075189082423,0,0,0.184105950251841,0,0,2.68578179737669,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,3.43921026771203,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,5.35701835878287,5.04425583328236,0,0.455324382702595,0.0887023701626388,0,0,0.679697329768317,0.131545547125698,0,0.333694205676207,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.118920090777569,0,1.20934568419972,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,1.12780701575824,0.193373663920732,0,0,0,0,0,0,0,1.26217249754548,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0,0,0.454672189309436,0.535928260312357,1.65833887891756,0,0,0,0,0.248298857183432,0.560659312903067,0.12729431655633,0,0,0.342233301085281,0.134704106029175,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,1.20764276154616,0 | |phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0.940364164434263,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.434021741431704,0.895661896959697,1.29557466407592,1.80302897343931,0.290796477559129,0,0.242584061187816,1.16214518452842,1.6446715520873,0.929119112685311,1.1507695692886,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,1.35426486594342,1.12945403725563,1.63743690034707,0.898893937780338,2.14258724659632,1.60464513538047,1.27867425159808,0.659702600373432,1.59570926097305,0.852449501065388,0,1.13477044938228,1.86846674698672,1.50749199154046,0,0.65156653411535,0,1.47311054395026,0.316462387440884,0.633765858935825,0.212604299965044,0.419317291016752,0.22465726229299,0,0.48217676009124,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,0,0,0,1.33888245105868,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.535798369704479,0.673588117878509,0.225222960966644,0,2.84779697870439,0,0,0,0,0.496971951695318,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.809364721840658,0.561803226808994,0,0.491337269247072,0.206651562351531,0,0,0,0,0.841680569770331,0.375355559615893,0,0,0,0,0.340296549480063,0,0.427114777637135,0.211931901159562,0,0.309157587715317,0,0,0,0.0974370051611986,0,0.276149695926898,0.161646056818812,0.355009592516614,0.705264687593482,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,1.12131084345361,1.30788020649984,1.10007428731425,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0,0,0.207970861530807,0,0,0,0,0,0,0,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.771048469013278,0.532685175939381,0.739144404124282,0.519254429183621,0.929683027679674,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.680374821106063,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0.325378394664303,0.309123034943167,0,0,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.137836572484531,0.429680979473094,0,1.19317278382541,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.235624804691373,0,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481764225311099,1.00899853595524,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0.511572370226872,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,1.73624994933292,0,0,0,0.221158519862449,0,1.09692698576986,0,0,0,0.569710279235006,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,1.13735843331278,0.450970258243478,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.959293472527256,0.794858446811959,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,1.12527203925513,0.275078873194468,0,0.899895566206002,0,0.242998226632099,0,0.157611414598396,0.367182116944987,0.316801009558219,11.4743897173021,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0,0.52893040697076,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,1.08803560673895,0.7520696820681,0,0,0.314108192500469,0.886068179966986,0.244052529803926,0,0,0.110929051536852,0.372578417648301,0.415045904808692,0,0.303298235083296,0.570930667089935,0,0.468334905806882,0,0.149254802886874,0.701139929541673,1.10961172300523,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.443565449968902,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.57785949122191,0.643324774124777,0,0,0,0,0,0,0,0.176689145945881,0,0,0.512483037175893,2.07258205038719,0,0,0,0,0.327130788511688,0,0,0,0,0.320075189082423,0,0,0.184105950251841,0,0,2.68578179737669,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,3.43921026771203,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,5.35701835878287,5.04425583328236,0,0.455324382702595,0.0887023701626388,0,0,0.679697329768317,0.131545547125698,0,0.333694205676207,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.118920090777569,0,1.20934568419972,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,1.12780701575824,0.193373663920732,0,0,0,0,0,0,0,1.26217249754548,0.135982980381829,0,0.5290268405154,0,0,0,0,0.109265571963696,0.506794004045748,0,0,0,0,0.454672189309436,0.535928260312357,1.65833887891756,0,0,0,0,0.248298857183432,0.560659312903067,0.12729431655633,0,0,0.342233301085281,0.134704106029175,0.358611026963382,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,1.20764276154616,0 | ||
|short_description=p8@EPB41L3 | |||
}} | }} |
Latest revision as of 22:54, 19 September 2015
Short description: | p8@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EPB41L3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000341928_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | Q9Y2J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.27e-20 | 48 |
phagocyte | 5.27e-20 | 48 |
monopoietic cell | 1.69e-19 | 59 |
monocyte | 1.69e-19 | 59 |
monoblast | 1.69e-19 | 59 |
promonocyte | 1.69e-19 | 59 |
macrophage dendritic cell progenitor | 1.02e-18 | 61 |
myeloid lineage restricted progenitor cell | 5.59e-17 | 66 |
granulocyte monocyte progenitor cell | 1.16e-16 | 67 |
classical monocyte | 1.06e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-15 | 42 |
myeloid leukocyte | 3.30e-15 | 72 |
leptomeningeal cell | 4.71e-12 | 3 |
myeloid cell | 8.17e-10 | 108 |
common myeloid progenitor | 8.17e-10 | 108 |
nongranular leukocyte | 5.92e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.87e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.50e-14 | 76 |
immune system | 1.28e-13 | 93 |
bone element | 7.82e-13 | 82 |
blood-cerebrospinal fluid barrier | 4.71e-12 | 3 |
skeletal element | 2.58e-11 | 90 |
hematopoietic system | 2.72e-11 | 98 |
blood island | 2.72e-11 | 98 |
hemolymphoid system | 4.57e-11 | 108 |
skeletal system | 5.17e-11 | 100 |
regional part of diencephalon | 2.03e-10 | 4 |
pineal body | 7.22e-10 | 2 |
regional part of epithalamus | 7.22e-10 | 2 |
secretory circumventricular organ | 7.22e-10 | 2 |
circumventricular organ | 7.22e-10 | 2 |
epithalamus | 7.22e-10 | 2 |
meninx | 1.94e-08 | 2 |
membrane organ | 1.94e-08 | 2 |
meningeal cluster | 1.94e-08 | 2 |