FFCP PHASE2:Hg19::chr18:5544022..5544045,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23136 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3380 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3380 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8K968 | ||
|association_with_transcript=-11bp_to_ENST00000540638_5end | |association_with_transcript=-11bp_to_ENST00000540638_5end | ||
|cluster_id=chr18:5544022..5544045,- | |cluster_id=chr18:5544022..5544045,- | ||
Latest revision as of 22:53, 19 September 2015
| Short description: | p4@EPB41L3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_EPB41L3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -11bp_to_ENST00000540638_5end |
| EntrezGene: | EPB41L3 |
| HGNC: | 3380 |
| UniProt: | A8K968 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@EPB41L3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 7.85e-24 | 48 |
| phagocyte | 7.85e-24 | 48 |
| classical monocyte | 5.40e-21 | 42 |
| CD14-positive, CD16-negative classical monocyte | 5.40e-21 | 42 |
| monopoietic cell | 1.05e-20 | 59 |
| monocyte | 1.05e-20 | 59 |
| monoblast | 1.05e-20 | 59 |
| promonocyte | 1.05e-20 | 59 |
| macrophage dendritic cell progenitor | 8.27e-20 | 61 |
| myeloid lineage restricted progenitor cell | 1.03e-15 | 66 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 4.02e-20 | 132 |
| neural tube | 1.82e-17 | 56 |
| neural rod | 1.82e-17 | 56 |
| future spinal cord | 1.82e-17 | 56 |
| neural keel | 1.82e-17 | 56 |
| neural plate | 4.33e-17 | 82 |
| presumptive neural plate | 4.33e-17 | 82 |
| regional part of nervous system | 1.79e-16 | 53 |
| regional part of brain | 1.79e-16 | 53 |
| neurectoderm | 2.75e-16 | 86 |
Showing 1 to 10 of 54 entries
