FFCP PHASE1:Hg19::chr18:5544022..5544045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23136 | |EntrezGene=23136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |HGNC=3380 | ||
|TSSclassifier=strong | |||
|UniProt=A8K968 | |UniProt=A8K968 | ||
|association_with_transcript=-11bp_to_ENST00000540638_5end | |association_with_transcript=-11bp_to_ENST00000540638_5end | ||
|cluster_id=chr18:5544022..5544045,- | |||
|description=CAGE_peak_4_at_EPB41L3_5end | |description=CAGE_peak_4_at_EPB41L3_5end | ||
|id=chr18:5544022..5544045,- | |id=chr18:5544022..5544045,- | ||
|ontology_enrichment_celltype=CL:0002057!7.29e-20!42;CL:0002194!5.06e-18!63;CL:0000576!5.06e-18!63;CL:0000040!5.06e-18!63;CL:0000559!5.06e-18!63;CL:0002009!3.46e-17!65;CL:0000860!8.69e-17!45;CL:0000839!3.08e-13!70;CL:0000557!3.23e-13!71;CL:0000766!1.31e-11!76;CL:0000057!8.00e-10!75;CL:0002078!9.16e-07!44 | |ontology_enrichment_celltype=CL:0002057!7.29e-20!42;CL:0002194!5.06e-18!63;CL:0000576!5.06e-18!63;CL:0000040!5.06e-18!63;CL:0000559!5.06e-18!63;CL:0002009!3.46e-17!65;CL:0000860!8.69e-17!45;CL:0000839!3.08e-13!70;CL:0000557!3.23e-13!71;CL:0000766!1.31e-11!76;CL:0000057!8.00e-10!75;CL:0002078!9.16e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-16;33!CL:0002057;1.20e-16;33!CL:0000473;5.55e-16;39!CL:0000234;5.55e-16;39!CL:0000576;3.99e-13;48!CL:0000766;1.93e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.85e-24,48;CL:0000234,7.85e-24,48;CL:0000860,5.40e-21,42;CL:0002057,5.40e-21,42;CL:0002194,1.05e-20,59;CL:0000576,1.05e-20,59;CL:0000040,1.05e-20,59;CL:0000559,1.05e-20,59;CL:0002009,8.27e-20,61;CL:0000839,1.03e-15,66;CL:0000557,1.14e-15,67;CL:0000766,5.89e-14,72;CL:0000057,8.73e-10,76 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!8.45e-18!86;UBERON:0007284!8.45e-18!86;UBERON:0001049!3.01e-17!57;UBERON:0005068!3.01e-17!57;UBERON:0006241!3.01e-17!57;UBERON:0007135!3.01e-17!57;UBERON:0002346!7.49e-17!90;UBERON:0005743!2.96e-16!86;UBERON:0002616!5.77e-16!59;UBERON:0001017!8.08e-16!82;UBERON:0007023!1.12e-15!115;UBERON:0000468!6.10e-15!659;UBERON:0000073!7.22e-15!94;UBERON:0001016!7.22e-15!94;UBERON:0000955!5.24e-14!69;UBERON:0006238!5.24e-14!69;UBERON:0003080!1.78e-13!42;UBERON:0002780!1.87e-13!41;UBERON:0001890!1.87e-13!41;UBERON:0006240!1.87e-13!41;UBERON:0000467!2.74e-13!625;UBERON:0000480!4.74e-13!626;UBERON:0004765!4.09e-12!101;UBERON:0001434!4.09e-12!101;UBERON:0000479!4.95e-12!787;UBERON:0003056!6.49e-12!61;UBERON:0002020!2.57e-11!34;UBERON:0003528!2.57e-11!34;UBERON:0001869!3.91e-11!32;UBERON:0001893!4.33e-11!34;UBERON:0002791!1.36e-10!33;UBERON:0000033!1.89e-10!123;UBERON:0002371!1.98e-10!80;UBERON:0000956!2.00e-10!25;UBERON:0000203!2.00e-10!25;UBERON:0002204!2.28e-10!167;UBERON:0002619!2.94e-10!22;UBERON:0001474!3.77e-10!86;UBERON:0000922!4.11e-10!612;UBERON:0000153!5.18e-10!129;UBERON:0007811!5.18e-10!129;UBERON:0002050!5.66e-10!605;UBERON:0005423!5.66e-10!605;UBERON:0003081!7.34e-10!216;UBERON:0000923!1.06e-09!604;UBERON:0005291!1.06e-09!604;UBERON:0006598!1.06e-09!604;UBERON:0002532!1.06e-09!604;UBERON:0001950!2.44e-09!20;UBERON:0000025!3.34e-09!194;UBERON:0000062!1.21e-08!511;UBERON:0004121!2.15e-08!169;UBERON:0000924!4.09e-08!173;UBERON:0006601!4.09e-08!173;UBERON:0002390!4.48e-07!102;UBERON:0003061!4.48e-07!102;UBERON:0002193!7.00e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;6.88e-11;25!UBERON:0000203;6.88e-11;25!UBERON:0002619;9.78e-11;22!UBERON:0001869;2.67e-10;32!UBERON:0003528;5.37e-10;34!UBERON:0002020;5.37e-10;34!UBERON:0001893;5.80e-10;34!UBERON:0002780;7.11e-10;41!UBERON:0001890;7.11e-10;41!UBERON:0001950;9.51e-10;20!UBERON:0002791;9.70e-10;32!UBERON:0000073;1.29e-09;53!UBERON:0002616;1.29e-09;53!UBERON:0001017;8.31e-07;75 | |||
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|phase1_expression=6.90377841228115,4.92431204949261,9.72585388262201,2.00146596706261,4.02264984984559,6.97870819280295,2.53299878168311,8.84407822797563,2.61185628199839,0.491467873003018,0.697801167972428,2.83973783769224,2.37390280405608,9.77754188384368,7.62213964174206,11.4295274896802,10.2458069764076,2.92124036154949,10.2465887746006,1.84681587115182,3.06001036866379,0.626909442956176,5.72471974262113,3.69560947696787,3.51519390865448,0,0,0,1.57345710739562,1.53531759238885,6.03782880932696,0,0,0,0,0,0.880801318004542,13.2958898047651,10.0272223735071,5.859293509328,11.867520134716,9.71680998056939,11.3333249759042,10.1778767145695,9.44689859222024,8.73302620276138,11.6214518452842,6.57868620834921,6.19412741790207,11.507695692886,11.7833925003386,10.4052181150977,7.92915065694223,6.45484683583826,2.70852973188684,12.2357520702693,8.18718450173537,9.66310983113864,16.2224462956578,14.1208771913481,11.5080682643827,13.8537546078421,10.3721101963249,11.5080682643827,15.9615081245721,18.1563271901165,18.0618452208717,9.2962006144995,14.0800387973454,9.77349801173025,9.6863920421339,15.0993830754902,10.1267963981083,5.70389273042243,7.01594189884644,3.56419697364239,4.38081661471331,6.60778328502628,6.91120022797445,5.41524213108372,6.16641699317179,5.47992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.786839080455332,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,14.6284119788377,3.35350429851818,5.11450247374121,2.1686349143074,1.50401373190767,5.21447468258965,3.1811437882044,4.37971383272372,0.850813354476611,2.88248216701333,2.63504357079378,3.53643503843824,0,0,4.21911611751088,3.65672448328461,2.52620124985844,0.476981248610684,1.14398982156026,0.371457501329565,5.76410981363445,6.881876760849,2.77712401286075,2.82653970962005,9.64848703282784,10.7296036356626,5.22487416342026,2.32575083252396,3.5576626268671,4.01664735317604,3.22263453687318,12.1643536914962,1.95249646038536,2.57364156242108,15.3926970097534,7.41187744757862,7.85852804191594,9.34675288011574,7.66583187329416,9.49265659568129,6.96166626935548,0,0,0,4.47274756525787,0.379891534993739,2.64818361626438,2.29469296599051,1.77334191099179,2.24271040056923,4.2699598291882,1.72667283892012,7.46906484959439,1.88594940897563,4.41347138406339,1.96764655938411,7.49028701823999,1.40592859100278,7.17968176709737,2.85235910772225,4.33401173600223,5.16711794032565,7.12240955219779,7.58434356192142,5.10385428137233,4.42203542322365,7.95608515053394,1.18800285728205,1.7308685049499,0,0,8.24846958374924,5.38009635449446,7.48073111807294,6.14568669233173,3.0648779579902,0.150238058906597,2.83580457900053,6.45802688479903,6.19316427573846,4.02670612203168,5.70173082560364,4.63736381572975,4.63752972082133,5.58350568994769,11.3080142601648,5.74878330451072,7.32057945307932,8.56064057373384,1.45481451136931,11.7153165530483,10.075209822764,4.57813599238317,0,0,0,0.487894824518382,0,0.69716365721711,1.0366105501537,0.756962552626885,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,1.96565443335525,1.77236972004421,0,0,4.97546649865724,0,0,1.10581869652794,0.185176890317059,1.62904152655162,3.11980435583874,7.21656710126366,3.82570336417754,3.28744343860301,2.59859605969933,1.38895653772983,2.85381228351897,0,0,11.3259822800203,3.97807250736704,9.95828787334479,0.93733833986777,0,0.850650583454319,0,0,0,0,0,0,0,0,1.71444314588856,2.29193055334967,1.17217447210047,1.71072446022705,4.8328921570562,0.300343057843917,4.28739648945867,3.58819469905154,7.41132117016576,12.6875234470244,0,0,4.22651376278,0,0,0.771622122786426,0,0.799266537048298,0,0,0,5.5375151329935,0,0.791951872933429,1.20575750823834,0,0.499864955910285,9.72990245129524,9.5428847372104,10.5416969741516,3.35474797688216,6.89171615004683,0,3.04040744001916,0,0,0,1.18218456121156,0.215627574859517,0.385029108839245,4.8277978602268,13.0139853857622,2.31986643833309,5.69555302136786,1.27587750330633,0,0,0,9.20186187893549,4.50153468953709,3.52644530809656,0,0.713715955188647,0,0.117141414992713,2.40756879782175,0,5.17365356462525,2.65690239414175,3.68738337083406,3.82287903659565,0.783204629850962,0.686286847621712,3.72182447021197,3.23571301227925,4.16237475433433,0.909382714338778,6.65741758041988,2.41912234663744,12.6534981987576,11.5096479966047,10.6650835884568,12.429497477803,4.09365799253363,4.66476371316462,5.93672265779964,11.1030979537912,7.99027763909072,12.0726919340299,2.59627214591811,10.8075651967762,0,0,0,0,0,0,0.451199612907412,4.31285887784723,2.35304930753057,1.46139224653261,4.11651352682215,2.27466768141793,3.91215522135986,3.02282282542995,4.62681758070868,0.270946437543853,0.501689773854853,0.764628819135115,0.831076008928724,2.23874754722178,0,0,3.84675187674584,1.96808787419823,4.55529752530024,1.54561517471583,0.0915694648183434,0.660075999364704,0.574265537996172,0,0,5.1235480694824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| ||
|short_description=p4@EPB41L3 | |short_description=p4@EPB41L3 | ||
}} | }} |
Latest revision as of 22:53, 19 September 2015
Short description: | p4@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPB41L3_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000540638_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | A8K968 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.85e-24 | 48 |
phagocyte | 7.85e-24 | 48 |
classical monocyte | 5.40e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.40e-21 | 42 |
monopoietic cell | 1.05e-20 | 59 |
monocyte | 1.05e-20 | 59 |
monoblast | 1.05e-20 | 59 |
promonocyte | 1.05e-20 | 59 |
macrophage dendritic cell progenitor | 8.27e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-15 | 66 |
granulocyte monocyte progenitor cell | 1.14e-15 | 67 |
myeloid leukocyte | 5.89e-14 | 72 |
fibroblast | 8.73e-10 | 76 |