FFCP PHASE1:Hg19::chr1:94586583..94586586,-: Difference between revisions
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|id=chr1:94586583..94586586,-
|short_description=p6@ABCA4
|description=CAGE_peak_6_at_ABCA4_5end
|association_with_transcript=15bp_to_AB384398,BC172262,BC172565_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24 | |EntrezGene=24 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34 | |HGNC=34 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_AB384398,BC172262,BC172565_5end | |||
|cluster_id=chr1:94586583..94586586,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_6_at_ABCA4_5end | |||
|id=chr1:94586583..94586586,- | |||
|ontology_enrichment_celltype=CL:0002253!6.58e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.93e-23;3!UBERON:0004161;2.63e-07;11 | |||
|ontology_enrichment_disease=DOID:1799!1.41e-14!1;DOID:10165!1.41e-14!1;DOID:1798!1.41e-14!1;DOID:3095!5.84e-10!22;DOID:2994!5.84e-10!22;DOID:305!2.92e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!2.11e-14!1;UBERON:0001018!2.11e-14!1;UBERON:0002473!2.11e-14!1;UBERON:0005340!2.11e-14!1;UBERON:0002316!2.11e-14!1;UBERON:0003544!2.11e-14!1;UBERON:0001020!2.11e-14!1;UBERON:0005970!2.11e-14!1;UBERON:0002437!2.11e-14!1;UBERON:0005162!7.52e-08!2;UBERON:0000122!7.52e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.50e-14;5!UBERON:0005388;1.50e-14;5!UBERON:0001802;1.50e-14;5!UBERON:0000970;2.41e-14;20!UBERON:0002104;1.02e-13;21!UBERON:0000020;1.25e-12;23!UBERON:0001032;3.75e-12;24!UBERON:0004456;3.75e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24 | |||
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|short_description=p6@ABCA4 | |||
}} | }} |
Latest revision as of 22:42, 19 September 2015
Short description: | p6@ABCA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABCA4_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 15bp_to_AB384398, BC172262, BC172565_5end |
EntrezGene: | ABCA4 |
HGNC: | 34 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |