FFCP PHASE1:Hg19::chr14:36990386..36990397,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000518149_5end | |association_with_transcript=-32bp_to_ENST00000518149_5end | ||
|cluster_id=chr14:36990386..36990397,- | |||
|coexpression_cluster_id=C113 | |coexpression_cluster_id=C113 | ||
|description=CAGE_peak_16_at_NKX2-1_5end | |description=CAGE_peak_16_at_NKX2-1_5end | ||
|id=chr14:36990386..36990397,- | |id=chr14:36990386..36990397,- | ||
|ontology_enrichment_celltype=CL:0000082!1.53e-07!19 | |ontology_enrichment_celltype=CL:0000082!1.53e-07!19 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.51e-53;5 | |||
|ontology_enrichment_disease=DOID:3905!9.91e-16!9;DOID:1325!8.76e-12!7;DOID:3904!8.76e-12!7;DOID:3112!4.85e-10!1;DOID:5409!1.46e-09!4;DOID:1324!1.62e-09!15;DOID:0050615!6.24e-09!16;DOID:3908!5.31e-08!5 | |ontology_enrichment_disease=DOID:3905!9.91e-16!9;DOID:1325!8.76e-12!7;DOID:3904!8.76e-12!7;DOID:3112!4.85e-10!1;DOID:5409!1.46e-09!4;DOID:1324!1.62e-09!15;DOID:0050615!6.24e-09!16;DOID:3908!5.31e-08!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!2.53e-28!5;UBERON:0004117!2.53e-28!5;UBERON:0007689!2.53e-28!5;UBERON:0007123!2.53e-28!5;UBERON:0003091!2.53e-28!5;UBERON:0000341!7.03e-19!2;UBERON:0002048!1.04e-18!22;UBERON:0000117!1.04e-18!22;UBERON:0000171!1.04e-18!22;UBERON:0000170!1.04e-18!22;UBERON:0005597!1.04e-18!22;UBERON:0000118!1.04e-18!22;UBERON:0005911!2.66e-18!82;UBERON:0005153!5.36e-14!37;UBERON:0008947!1.22e-13!38;UBERON:0003258!1.22e-13!38;UBERON:0009722!5.09e-13!11;UBERON:0007690!5.09e-13!11;UBERON:0005178!7.47e-12!34;UBERON:0002224!7.47e-12!34;UBERON:0005181!1.71e-11!35;UBERON:0002702!2.16e-10!1;UBERON:0002171!2.37e-10!1;UBERON:0006518!2.37e-10!1;UBERON:0008949!2.37e-10!1;UBERON:0000101!2.37e-10!1;UBERON:0002167!2.37e-10!1;UBERON:0001007!6.66e-10!155;UBERON:0001555!6.66e-10!155;UBERON:0007026!6.66e-10!155;UBERON:0005157!7.07e-10!51;UBERON:0008814!1.35e-09!15;UBERON:0000065!1.72e-09!53;UBERON:0004119!7.12e-09!169;UBERON:0000925!7.12e-09!169;UBERON:0006595!7.12e-09!169;UBERON:0004802!1.53e-07!19;UBERON:0000115!1.53e-07!19;UBERON:0000915!1.73e-07!52;UBERON:0003929!4.38e-07!54;UBERON:0000477!9.10e-07!286 | |ontology_enrichment_uberon=UBERON:0002046!2.53e-28!5;UBERON:0004117!2.53e-28!5;UBERON:0007689!2.53e-28!5;UBERON:0007123!2.53e-28!5;UBERON:0003091!2.53e-28!5;UBERON:0000341!7.03e-19!2;UBERON:0002048!1.04e-18!22;UBERON:0000117!1.04e-18!22;UBERON:0000171!1.04e-18!22;UBERON:0000170!1.04e-18!22;UBERON:0005597!1.04e-18!22;UBERON:0000118!1.04e-18!22;UBERON:0005911!2.66e-18!82;UBERON:0005153!5.36e-14!37;UBERON:0008947!1.22e-13!38;UBERON:0003258!1.22e-13!38;UBERON:0009722!5.09e-13!11;UBERON:0007690!5.09e-13!11;UBERON:0005178!7.47e-12!34;UBERON:0002224!7.47e-12!34;UBERON:0005181!1.71e-11!35;UBERON:0002702!2.16e-10!1;UBERON:0002171!2.37e-10!1;UBERON:0006518!2.37e-10!1;UBERON:0008949!2.37e-10!1;UBERON:0000101!2.37e-10!1;UBERON:0002167!2.37e-10!1;UBERON:0001007!6.66e-10!155;UBERON:0001555!6.66e-10!155;UBERON:0007026!6.66e-10!155;UBERON:0005157!7.07e-10!51;UBERON:0008814!1.35e-09!15;UBERON:0000065!1.72e-09!53;UBERON:0004119!7.12e-09!169;UBERON:0000925!7.12e-09!169;UBERON:0006595!7.12e-09!169;UBERON:0004802!1.53e-07!19;UBERON:0000115!1.53e-07!19;UBERON:0000915!1.73e-07!52;UBERON:0003929!4.38e-07!54;UBERON:0000477!9.10e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;2.51e-53;5!UBERON:0000341;5.96e-34;2!UBERON:0000974;2.59e-12;6!UBERON:0002368;5.52e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.87e-53,5;UBERON:0004117,2.87e-53,5;UBERON:0007689,2.87e-53,5;UBERON:0007123,2.87e-53,5;UBERON:0003091,2.87e-53,5;UBERON:0000341,5.04e-34,2;UBERON:0009722,5.49e-25,11;UBERON:0007690,5.49e-25,11;UBERON:0008814,9.05e-16,18;UBERON:0002368,1.14e-08,35;UBERON:0000974,6.13e-08,10;UBERON:0000949,5.58e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,2.85677317756488,0,0,0.112131862580613,3.56424086357723,2.42540626749863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.471612915298998,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,2.85677317756488,0,0,0.112131862580613,3.56424086357723,2.42540626749863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@NKX2-1 | |short_description=p16@NKX2-1 | ||
}} | }} |
Latest revision as of 22:38, 19 September 2015
Short description: | p16@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NKX2-1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | -32bp_to_ENST00000518149_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.87e-53 | 5 |
pharyngeal pouch | 2.87e-53 | 5 |
thyroid diverticulum | 2.87e-53 | 5 |
pharyngeal pouch 2 | 2.87e-53 | 5 |
thyroid primordium | 2.87e-53 | 5 |
throat | 5.04e-34 | 2 |
entire pharyngeal arch endoderm | 5.49e-25 | 11 |
early pharyngeal endoderm | 5.49e-25 | 11 |
pharyngeal arch system | 9.05e-16 | 18 |
endocrine gland | 1.14e-08 | 35 |
neck | 6.13e-08 | 10 |
endocrine system | 5.58e-07 | 45 |