FFCP PHASE1:Hg19::chr14:36989940..36989957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVG2 | |UniProt=F8VVG2 | ||
|association_with_transcript=196bp_to_ENST00000546983_5end | |association_with_transcript=196bp_to_ENST00000546983_5end | ||
|cluster_id=chr14:36989940..36989957,- | |||
|coexpression_cluster_id=C3426 | |coexpression_cluster_id=C3426 | ||
|description=CAGE_peak_2_at_NKX2-1_5end | |description=CAGE_peak_2_at_NKX2-1_5end | ||
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|ontology_enrichment_celltype=CL:0002368!2.44e-08!13;CL:0002076!1.15e-07!43;CL:0000082!3.13e-07!19 | |ontology_enrichment_celltype=CL:0002368!2.44e-08!13;CL:0002076!1.15e-07!43;CL:0000082!3.13e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.64e-07;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.64e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.49e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.67e-16;5!UBERON:0010122;1.99e-10;2!UBERON:0008947;9.68e-08;29!UBERON:0001041;1.89e-07;30 | |ontology_enrichment_development_v019=UBERON:0007123;6.67e-16;5!UBERON:0010122;1.99e-10;2!UBERON:0008947;9.68e-08;29!UBERON:0001041;1.89e-07;30 | ||
|ontology_enrichment_disease=DOID:305!4.18e-12!106;DOID:1749!6.92e-10!14;DOID:162!4.02e-09!235;DOID:0050687!7.36e-09!143;DOID:14566!1.12e-08!239;DOID:3905!8.87e-08!9;DOID:0050615!3.40e-07!16 | |ontology_enrichment_disease=DOID:305!4.18e-12!106;DOID:1749!6.92e-10!14;DOID:162!4.02e-09!235;DOID:0050687!7.36e-09!143;DOID:14566!1.12e-08!239;DOID:3905!8.87e-08!9;DOID:0050615!3.40e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:0050615;1.01e-07;16 | |ontology_enrichment_disease_v019=DOID:0050615;1.01e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.03e-07,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002046;6.67e-16;5!UBERON:0002048;1.71e-13;22!UBERON:0000117;1.71e-13;22!UBERON:0000171;1.71e-13;22!UBERON:0000170;1.71e-13;22!UBERON:0001873;1.99e-10;2!UBERON:0004821;1.64e-07;3!UBERON:0007499;1.64e-07;3!UBERON:0003215;1.64e-07;3!UBERON:0010368;1.64e-07;3!UBERON:0009911;1.64e-07;3!UBERON:0002299;1.64e-07;3!UBERON:0006524;1.64e-07;3!UBERON:0008874;1.64e-07;3!UBERON:0002169;1.64e-07;3!UBERON:0004894;1.64e-07;3!UBERON:0005383;3.16e-07;3!UBERON:0005382;3.16e-07;3!UBERON:0005178;3.23e-07;34!UBERON:0002224;3.23e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0002046;6.67e-16;5!UBERON:0002048;1.71e-13;22!UBERON:0000117;1.71e-13;22!UBERON:0000171;1.71e-13;22!UBERON:0000170;1.71e-13;22!UBERON:0001873;1.99e-10;2!UBERON:0004821;1.64e-07;3!UBERON:0007499;1.64e-07;3!UBERON:0003215;1.64e-07;3!UBERON:0010368;1.64e-07;3!UBERON:0009911;1.64e-07;3!UBERON:0002299;1.64e-07;3!UBERON:0006524;1.64e-07;3!UBERON:0008874;1.64e-07;3!UBERON:0002169;1.64e-07;3!UBERON:0004894;1.64e-07;3!UBERON:0005383;3.16e-07;3!UBERON:0005382;3.16e-07;3!UBERON:0005178;3.23e-07;34!UBERON:0002224;3.23e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.00e-16,5;UBERON:0004117,5.00e-16,5;UBERON:0007689,5.00e-16,5;UBERON:0007123,5.00e-16,5;UBERON:0003091,5.00e-16,5;UBERON:0002048,1.58e-13,22;UBERON:0000117,1.58e-13,22;UBERON:0000171,1.58e-13,22;UBERON:0000170,1.58e-13,22;UBERON:0005597,1.58e-13,22;UBERON:0000118,1.58e-13,22;UBERON:0005911,2.55e-10,82;UBERON:0001873,2.72e-10,2;UBERON:0010122,2.72e-10,2;UBERON:0005153,1.58e-09,37;UBERON:0005178,2.72e-08,34;UBERON:0002224,2.72e-08,34;UBERON:0005181,5.10e-08,35;UBERON:0004821,1.49e-07,3;UBERON:0003215,1.49e-07,3;UBERON:0010368,1.49e-07,3;UBERON:0009911,1.49e-07,3;UBERON:0002299,1.49e-07,3;UBERON:0006524,1.49e-07,3;UBERON:0008874,1.49e-07,3;UBERON:0002169,1.49e-07,3;UBERON:0004894,1.49e-07,3;UBERON:0009722,2.51e-07,11;UBERON:0007690,2.51e-07,11;UBERON:0008947,2.77e-07,38;UBERON:0003258,2.77e-07,38;UBERON:0005157,3.65e-07,47;UBERON:0005383,3.88e-07,3;UBERON:0005382,3.88e-07,3;UBERON:0001007,6.99e-07,145;UBERON:0001555,6.99e-07,145;UBERON:0007026,6.99e-07,145 | |||
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| ||
|short_description=p2@NKX2-1 | |short_description=p2@NKX2-1 | ||
}} | }} |
Latest revision as of 22:38, 19 September 2015
Short description: | p2@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-1_5end |
Coexpression cluster: | C3426_bronchioalveolar_anaplastic_astrocytoma_small_somatostatinoma_large_prostate |
Association with transcript: | 196bp_to_ENST00000546983_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | F8VVG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 5.00e-16 | 5 |
pharyngeal pouch | 5.00e-16 | 5 |
thyroid diverticulum | 5.00e-16 | 5 |
pharyngeal pouch 2 | 5.00e-16 | 5 |
thyroid primordium | 5.00e-16 | 5 |
lung | 1.58e-13 | 22 |
respiratory tube | 1.58e-13 | 22 |
respiration organ | 1.58e-13 | 22 |
pair of lungs | 1.58e-13 | 22 |
lung primordium | 1.58e-13 | 22 |
lung bud | 1.58e-13 | 22 |
endo-epithelium | 2.55e-10 | 82 |
caudate nucleus | 2.72e-10 | 2 |
future caudate nucleus | 2.72e-10 | 2 |
epithelial bud | 1.58e-09 | 37 |
thoracic cavity element | 2.72e-08 | 34 |
thoracic cavity | 2.72e-08 | 34 |
thoracic segment organ | 5.10e-08 | 35 |
pulmonary alveolus epithelium | 1.49e-07 | 3 |
alveolus | 1.49e-07 | 3 |
pulmonary lobule | 1.49e-07 | 3 |
lobule | 1.49e-07 | 3 |
alveolus of lung | 1.49e-07 | 3 |
alveolar system | 1.49e-07 | 3 |
pulmonary acinus | 1.49e-07 | 3 |
alveolar sac | 1.49e-07 | 3 |
alveolar wall | 1.49e-07 | 3 |
entire pharyngeal arch endoderm | 2.51e-07 | 11 |
early pharyngeal endoderm | 2.51e-07 | 11 |
respiratory primordium | 2.77e-07 | 38 |
endoderm of foregut | 2.77e-07 | 38 |
epithelial fold | 3.65e-07 | 47 |
caudate-putamen | 3.88e-07 | 3 |
dorsal striatum | 3.88e-07 | 3 |
digestive system | 6.99e-07 | 145 |
digestive tract | 6.99e-07 | 145 |
primitive gut | 6.99e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.03e-07 | 16 |