FFCP PHASE1:Hg19::chr1:94526344..94526353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=24 | |EntrezGene=24 | ||
| Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-57bp_to_U66691_5end | |association_with_transcript=-57bp_to_U66691_5end | ||
|cluster_id=chr1:94526344..94526353,- | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_4_at_ABCA4_5end | |description=CAGE_peak_4_at_ABCA4_5end | ||
Latest revision as of 22:36, 19 September 2015
| Short description: | p4@ABCA4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_ABCA4_5end |
| Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
| Association with transcript: | -57bp_to_U66691_5end |
| EntrezGene: | ABCA4 |
| HGNC: | 34 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@ABCA4 |
|---|
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1.0
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| capillary endothelial cell | 7.21e-85 | 3 |
| lymphangioblast | 7.48e-43 | 6 |
| endothelial cell of lymphatic vessel | 7.48e-43 | 6 |
| vascular lymphangioblast | 7.48e-43 | 6 |
| endothelial cell of vascular tree | 1.86e-42 | 24 |
| endothelial cell | 1.73e-38 | 36 |
| meso-epithelial cell | 6.99e-31 | 45 |
| lining cell | 4.74e-24 | 58 |
| barrier cell | 4.74e-24 | 58 |
| blood vessel endothelial cell | 6.53e-15 | 18 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| microcirculatory vessel | 7.21e-85 | 3 |
| endothelium of capillary | 7.21e-85 | 3 |
| capillary | 7.21e-85 | 3 |
| lymphatic vessel | 2.19e-32 | 8 |
| lymph vasculature | 2.19e-32 | 8 |
| lymphatic part of lymphoid system | 2.19e-32 | 8 |
| lymphoid system | 4.28e-26 | 10 |
| vessel | 3.04e-15 | 68 |
| blood vessel endothelium | 6.53e-15 | 18 |
| endothelium | 6.53e-15 | 18 |
Showing 1 to 10 of 17 entries
