FFCP PHASE1:Hg19::chr12:6569995..6570030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55080 | |EntrezGene=55080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30683 | |HGNC=30683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_ENST00000544289_5end | |||
|cluster_id=chr12:6569995..6570030,+ | |||
|description=CAGE_peak_5_at_TAPBPL_5end | |||
|id=chr12:6569995..6570030,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.58e-22!18;CL:0000789!2.58e-22!18;CL:0002420!2.58e-22!18;CL:0002419!2.58e-22!18;CL:0000790!2.58e-22!18;CL:0000542!5.06e-18!53;CL:0000051!5.06e-18!53;CL:0000838!6.82e-17!52;CL:0000084!1.09e-14!25;CL:0000827!1.09e-14!25;CL:0000625!1.11e-14!11;CL:0000738!5.43e-13!140;CL:0002087!3.37e-11!119;CL:0000624!5.76e-11!6;CL:0000037!3.29e-10!172;CL:0000566!3.29e-10!172;CL:0000988!1.63e-09!182;CL:0002031!4.40e-08!124;CL:0002032!6.33e-08!165;CL:0000837!6.33e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.70e-21;18!CL:0000789;2.70e-21;18!CL:0002419;2.70e-21;18!CL:0000624;3.49e-21;6!CL:0000084;6.52e-15;25!CL:0000898;5.99e-08;3!CL:0000625;1.72e-07;11!CL:0000895;8.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.86e-21,18;CL:0000789,2.86e-21,18;CL:0002420,2.86e-21,18;CL:0002419,2.86e-21,18;CL:0000790,2.86e-21,18;CL:0000624,6.64e-21,6;CL:0000084,6.79e-15,25;CL:0000827,6.79e-15,25;CL:0000542,2.92e-11,53;CL:0000051,2.92e-11,53;CL:0000838,1.32e-09,52;CL:0000898,6.21e-08,3;CL:0000625,1.37e-07,11;CL:0000810,8.21e-07,1;CL:0000895,8.21e-07,1;CL:0002436,8.21e-07,1;CL:0002427,8.21e-07,1;CL:0002428,8.21e-07,1;CL:0002429,8.21e-07,1;CL:0002433,8.21e-07,1;CL:0002431,8.21e-07,1;CL:0002432,8.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-21;18!UBERON:0007297;1.35e-11;2!UBERON:0005754;6.57e-07;1!CL:0002427;8.19e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.03e-12!15;UBERON:0000179!7.03e-12!15;UBERON:0000463!7.03e-12!15;UBERON:0007023!5.17e-09!115;UBERON:0004177!4.16e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.43e-12;2!UBERON:0006947;5.21e-08;3!UBERON:0004054;5.21e-08;3!UBERON:0000998;6.57e-07;1!UBERON:0006868;6.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.76e-12,2;UBERON:0006947,3.68e-08,3;UBERON:0004054,3.68e-08,3;UBERON:0000998,6.59e-07,1;UBERON:0006868,6.59e-07,1 | |||
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| 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| ||
|short_description=p5@TAPBPL | |||
}} | }} |
Latest revision as of 22:30, 19 September 2015
Short description: | p5@TAPBPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TAPBPL_5end |
Coexpression cluster: | NA |
Association with transcript: | -170bp_to_ENST00000544289_5end |
EntrezGene: | TAPBPL |
HGNC: | 30683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.86e-21 | 18 |
alpha-beta T cell | 2.86e-21 | 18 |
immature T cell | 2.86e-21 | 18 |
mature T cell | 2.86e-21 | 18 |
immature alpha-beta T cell | 2.86e-21 | 18 |
CD4-positive, alpha-beta T cell | 6.64e-21 | 6 |
T cell | 6.79e-15 | 25 |
pro-T cell | 6.79e-15 | 25 |
lymphocyte | 2.92e-11 | 53 |
common lymphoid progenitor | 2.92e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
naive T cell | 6.21e-08 | 3 |
CD8-positive, alpha-beta T cell | 1.37e-07 | 11 |
CD4-positive, alpha-beta thymocyte | 8.21e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.21e-07 | 1 |
mature CD4 single-positive thymocyte | 8.21e-07 | 1 |
resting double-positive thymocyte | 8.21e-07 | 1 |
double-positive blast | 8.21e-07 | 1 |
CD69-positive double-positive thymocyte | 8.21e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.21e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.21e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.76e-12 | 2 |
male genital duct | 3.68e-08 | 3 |
internal male genitalia | 3.68e-08 | 3 |
seminal vesicle | 6.59e-07 | 1 |
seminal fluid secreting gland | 6.59e-07 | 1 |