FFCP PHASE1:Hg19::chr12:6569995..6570030,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55080 | |EntrezGene=55080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30683 | |HGNC=30683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_ENST00000544289_5end | |association_with_transcript=-170bp_to_ENST00000544289_5end | ||
|cluster_id=chr12:6569995..6570030,+ | |||
|description=CAGE_peak_5_at_TAPBPL_5end | |description=CAGE_peak_5_at_TAPBPL_5end | ||
|id=chr12:6569995..6570030,+ | |id=chr12:6569995..6570030,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.58e-22!18;CL:0000789!2.58e-22!18;CL:0002420!2.58e-22!18;CL:0002419!2.58e-22!18;CL:0000790!2.58e-22!18;CL:0000542!5.06e-18!53;CL:0000051!5.06e-18!53;CL:0000838!6.82e-17!52;CL:0000084!1.09e-14!25;CL:0000827!1.09e-14!25;CL:0000625!1.11e-14!11;CL:0000738!5.43e-13!140;CL:0002087!3.37e-11!119;CL:0000624!5.76e-11!6;CL:0000037!3.29e-10!172;CL:0000566!3.29e-10!172;CL:0000988!1.63e-09!182;CL:0002031!4.40e-08!124;CL:0002032!6.33e-08!165;CL:0000837!6.33e-08!165 | |ontology_enrichment_celltype=CL:0000791!2.58e-22!18;CL:0000789!2.58e-22!18;CL:0002420!2.58e-22!18;CL:0002419!2.58e-22!18;CL:0000790!2.58e-22!18;CL:0000542!5.06e-18!53;CL:0000051!5.06e-18!53;CL:0000838!6.82e-17!52;CL:0000084!1.09e-14!25;CL:0000827!1.09e-14!25;CL:0000625!1.11e-14!11;CL:0000738!5.43e-13!140;CL:0002087!3.37e-11!119;CL:0000624!5.76e-11!6;CL:0000037!3.29e-10!172;CL:0000566!3.29e-10!172;CL:0000988!1.63e-09!182;CL:0002031!4.40e-08!124;CL:0002032!6.33e-08!165;CL:0000837!6.33e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.70e-21;18!CL:0000789;2.70e-21;18!CL:0002419;2.70e-21;18!CL:0000624;3.49e-21;6!CL:0000084;6.52e-15;25!CL:0000898;5.99e-08;3!CL:0000625;1.72e-07;11!CL:0000895;8.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.86e-21,18;CL:0000789,2.86e-21,18;CL:0002420,2.86e-21,18;CL:0002419,2.86e-21,18;CL:0000790,2.86e-21,18;CL:0000624,6.64e-21,6;CL:0000084,6.79e-15,25;CL:0000827,6.79e-15,25;CL:0000542,2.92e-11,53;CL:0000051,2.92e-11,53;CL:0000838,1.32e-09,52;CL:0000898,6.21e-08,3;CL:0000625,1.37e-07,11;CL:0000810,8.21e-07,1;CL:0000895,8.21e-07,1;CL:0002436,8.21e-07,1;CL:0002427,8.21e-07,1;CL:0002428,8.21e-07,1;CL:0002429,8.21e-07,1;CL:0002433,8.21e-07,1;CL:0002431,8.21e-07,1;CL:0002432,8.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-21;18!UBERON:0007297;1.35e-11;2!UBERON:0005754;6.57e-07;1!CL:0002427;8.19e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.03e-12!15;UBERON:0000179!7.03e-12!15;UBERON:0000463!7.03e-12!15;UBERON:0007023!5.17e-09!115;UBERON:0004177!4.16e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.43e-12;2!UBERON:0006947;5.21e-08;3!UBERON:0004054;5.21e-08;3!UBERON:0000998;6.57e-07;1!UBERON:0006868;6.57e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.76e-12,2;UBERON:0006947,3.68e-08,3;UBERON:0004054,3.68e-08,3;UBERON:0000998,6.59e-07,1;UBERON:0006868,6.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,0.903106483949403,1.25937250101887,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0.651032612147555,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,1.7703879310245,1.17903228824749,1.02800749499755,1.83905144929746,0.32592226663359,0.473447805734733,0,2.45103005147382,1.47302953737419,1.32920336750173,0.270803863765016,1.40900451698243,2.47112760363769,4.1109476150919,5.25065033793112,7.53488022911136,2.07601188426885,2.67540828089713,1.04535523804977,4.41906436520508,3.44898444241729,2.40539211837841,2.78321661221453,0.95569624297229,1.95325036156926,0.950452044448374,1.6563263098555,1.79181255616186,1.24930726552346,0.710331756132051,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,1.66762242820452,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,1.48642540100575,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,1.92199335066233,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,1.48849806543585,0.790446527591777,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,7.28358725083958,2.04895972216168,0,0.230467975111559,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.72090943528111,0,0,6.35080575286394,0.22910686854405,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,9.79423328064303,0,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.581300188524055,0.248298857183432,0,0,0.404234377916439,0.653150243690884,0,0.5388164241167,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,0.903106483949403,1.25937250101887,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0,0.651032612147555,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,1.7703879310245,1.17903228824749,1.02800749499755,1.83905144929746,0.32592226663359,0.473447805734733,0,2.45103005147382,1.47302953737419,1.32920336750173,0.270803863765016,1.40900451698243,2.47112760363769,4.1109476150919,5.25065033793112,7.53488022911136,2.07601188426885,2.67540828089713,1.04535523804977,4.41906436520508,3.44898444241729,2.40539211837841,2.78321661221453,0.95569624297229,1.95325036156926,0.950452044448374,1.6563263098555,1.79181255616186,1.24930726552346,0.710331756132051,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.788123040807709,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,1.66762242820452,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,1.48642540100575,0,0,0,0,0,1.2700414963433,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,1.92199335066233,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,1.48849806543585,0.790446527591777,0.60896299190448,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,7.28358725083958,2.04895972216168,0,0.230467975111559,0,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.72090943528111,0,0,6.35080575286394,0.22910686854405,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,9.79423328064303,0,0,0,0,1.83491713361816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.581300188524055,0.248298857183432,0,0,0.404234377916439,0.653150243690884,0,0.5388164241167,0.215166616178029,0.665320713092027,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0.961705476909699 | ||
|short_description=p5@TAPBPL | |short_description=p5@TAPBPL | ||
}} | }} |
Latest revision as of 22:30, 19 September 2015
Short description: | p5@TAPBPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TAPBPL_5end |
Coexpression cluster: | NA |
Association with transcript: | -170bp_to_ENST00000544289_5end |
EntrezGene: | TAPBPL |
HGNC: | 30683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.86e-21 | 18 |
alpha-beta T cell | 2.86e-21 | 18 |
immature T cell | 2.86e-21 | 18 |
mature T cell | 2.86e-21 | 18 |
immature alpha-beta T cell | 2.86e-21 | 18 |
CD4-positive, alpha-beta T cell | 6.64e-21 | 6 |
T cell | 6.79e-15 | 25 |
pro-T cell | 6.79e-15 | 25 |
lymphocyte | 2.92e-11 | 53 |
common lymphoid progenitor | 2.92e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-09 | 52 |
naive T cell | 6.21e-08 | 3 |
CD8-positive, alpha-beta T cell | 1.37e-07 | 11 |
CD4-positive, alpha-beta thymocyte | 8.21e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.21e-07 | 1 |
mature CD4 single-positive thymocyte | 8.21e-07 | 1 |
resting double-positive thymocyte | 8.21e-07 | 1 |
double-positive blast | 8.21e-07 | 1 |
CD69-positive double-positive thymocyte | 8.21e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.21e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.21e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.76e-12 | 2 |
male genital duct | 3.68e-08 | 3 |
internal male genitalia | 3.68e-08 | 3 |
seminal vesicle | 6.59e-07 | 1 |
seminal fluid secreting gland | 6.59e-07 | 1 |