FFCP PHASE1:Hg19::chr10:91152368..91152419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3434 | |EntrezGene=3434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5407 | |HGNC=5407 | ||
|TSSclassifier=strong | |||
|UniProt=P09914,Q5T7J1 | |UniProt=P09914,Q5T7J1 | ||
|association_with_transcript=46bp_to_NM_001548,uc001kgi.2,uc009xtt.2_5end | |association_with_transcript=46bp_to_NM_001548,uc001kgi.2,uc009xtt.2_5end | ||
|cluster_id=chr10:91152368..91152419,+ | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_1_at_IFIT1_5end | |description=CAGE_peak_1_at_IFIT1_5end | ||
|id=chr10:91152368..91152419,+ | |id=chr10:91152368..91152419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.66e-07,48;CL:0000234,8.66e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-22!115;UBERON:0002616!2.60e-13!59;UBERON:0001049!1.12e-12!57;UBERON:0005068!1.12e-12!57;UBERON:0006241!1.12e-12!57;UBERON:0007135!1.12e-12!57;UBERON:0000955!7.35e-12!69;UBERON:0006238!7.35e-12!69;UBERON:0001017!1.09e-10!82;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0000062!1.78e-10!511;UBERON:0003080!1.97e-10!42;UBERON:0005743!6.31e-10!86;UBERON:0002020!2.09e-08!34;UBERON:0003528!2.09e-08!34;UBERON:0001893!2.39e-08!34;UBERON:0003075!4.14e-08!86;UBERON:0007284!4.14e-08!86;UBERON:0002791!5.70e-08!33;UBERON:0000073!7.34e-08!94;UBERON:0001016!7.34e-08!94;UBERON:0001869!9.98e-08!32;UBERON:0000033!2.04e-07!123;UBERON:0000153!2.05e-07!129;UBERON:0007811!2.05e-07!129;UBERON:0002346!3.88e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.56e-08;41!UBERON:0001890;7.56e-08;41!UBERON:0001893;1.38e-07;34!UBERON:0000073;1.41e-07;53!UBERON:0002616;1.41e-07;53!UBERON:0003528;2.19e-07;34!UBERON:0002020;2.19e-07;34!UBERON:0002791;3.39e-07;32!UBERON:0001869;3.57e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.42e-22,114;UBERON:0001049,1.08e-12,56;UBERON:0005068,1.08e-12,56;UBERON:0006241,1.08e-12,56;UBERON:0007135,1.08e-12,56;UBERON:0000955,6.23e-12,68;UBERON:0006238,6.23e-12,68;UBERON:0000073,6.57e-12,53;UBERON:0002616,6.57e-12,53;UBERON:0001017,1.12e-10,81;UBERON:0002780,1.45e-10,41;UBERON:0001890,1.45e-10,41;UBERON:0003080,1.45e-10,41;UBERON:0006240,1.45e-10,41;UBERON:0003528,1.87e-08,34;UBERON:0002020,1.87e-08,34;UBERON:0001893,2.13e-08,34;UBERON:0001016,2.66e-08,89;UBERON:0002791,8.54e-08,32;UBERON:0001869,9.00e-08,32;UBERON:0003075,1.62e-07,82;UBERON:0007284,1.62e-07,82;UBERON:0010314,1.97e-07,132 | |||
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| ||
|short_description=p1@IFIT1 | |short_description=p1@IFIT1 | ||
}} | }} |
Latest revision as of 22:29, 19 September 2015
Short description: | p1@IFIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFIT1_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | 46bp_to_NM_001548, uc001kgi.2, uc009xtt.2_5end |
EntrezGene: | IFIT1 |
HGNC: | 5407 |
UniProt: | P09914Q5T7J1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.66e-07 | 48 |
phagocyte | 8.66e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.42e-22 | 114 |
neural tube | 1.08e-12 | 56 |
neural rod | 1.08e-12 | 56 |
future spinal cord | 1.08e-12 | 56 |
neural keel | 1.08e-12 | 56 |
brain | 6.23e-12 | 68 |
future brain | 6.23e-12 | 68 |
regional part of nervous system | 6.57e-12 | 53 |
regional part of brain | 6.57e-12 | 53 |
central nervous system | 1.12e-10 | 81 |
regional part of forebrain | 1.45e-10 | 41 |
forebrain | 1.45e-10 | 41 |
anterior neural tube | 1.45e-10 | 41 |
future forebrain | 1.45e-10 | 41 |
brain grey matter | 1.87e-08 | 34 |
gray matter | 1.87e-08 | 34 |
telencephalon | 2.13e-08 | 34 |
nervous system | 2.66e-08 | 89 |
regional part of telencephalon | 8.54e-08 | 32 |
cerebral hemisphere | 9.00e-08 | 32 |
neural plate | 1.62e-07 | 82 |
presumptive neural plate | 1.62e-07 | 82 |
structure with developmental contribution from neural crest | 1.97e-07 | 132 |