FFCP PHASE1:Hg19::chrX:150565253..150565267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203547 | |EntrezGene=203547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22082 | |HGNC=22082 | ||
|TSSclassifier=strong | |||
|UniProt=Q3ZAQ7 | |UniProt=Q3ZAQ7 | ||
|association_with_transcript=-389bp_to_NM_001017980_5end | |association_with_transcript=-389bp_to_NM_001017980_5end | ||
|cluster_id=chrX:150565253..150565267,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_VMA21_5end | |description=CAGE_peak_3_at_VMA21_5end | ||
|id=chrX:150565253..150565267,+ | |id=chrX:150565253..150565267,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.80e-26!42;CL:0000860!7.94e-22!45;CL:0002194!5.41e-18!63;CL:0000576!5.41e-18!63;CL:0000040!5.41e-18!63;CL:0000559!5.41e-18!63;CL:0000557!1.63e-17!71;CL:0002009!2.72e-17!65;CL:0000839!2.16e-16!70;CL:0000766!1.02e-15!76;CL:0002087!8.28e-13!119;CL:0000738!1.43e-11!140;CL:0002031!2.24e-11!124;CL:0000763!6.13e-08!112;CL:0000049!6.13e-08!112;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000988!2.42e-07!182;CL:0002032!8.56e-07!165;CL:0000837!8.56e-07!165 | |ontology_enrichment_celltype=CL:0002057!8.80e-26!42;CL:0000860!7.94e-22!45;CL:0002194!5.41e-18!63;CL:0000576!5.41e-18!63;CL:0000040!5.41e-18!63;CL:0000559!5.41e-18!63;CL:0000557!1.63e-17!71;CL:0002009!2.72e-17!65;CL:0000839!2.16e-16!70;CL:0000766!1.02e-15!76;CL:0002087!8.28e-13!119;CL:0000738!1.43e-11!140;CL:0002031!2.24e-11!124;CL:0000763!6.13e-08!112;CL:0000049!6.13e-08!112;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000988!2.42e-07!182;CL:0002032!8.56e-07!165;CL:0000837!8.56e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-30;33!CL:0002057;2.45e-30;33!CL:0000576;2.21e-24;48!CL:0000473;6.74e-24;39!CL:0000234;6.74e-24;39!CL:0000766;2.13e-16;69!CL:0002087;3.45e-08;104!CL:0000763;1.80e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.48e-39,42;CL:0002057,3.48e-39,42;CL:0000473,1.07e-37,48;CL:0000234,1.07e-37,48;CL:0002194,4.81e-32,59;CL:0000576,4.81e-32,59;CL:0000040,4.81e-32,59;CL:0000559,4.81e-32,59;CL:0002009,2.43e-30,61;CL:0000557,6.44e-29,67;CL:0000766,8.72e-29,72;CL:0000839,1.57e-28,66;CL:0002087,1.36e-22,115;CL:0002031,2.60e-20,120;CL:0000738,8.00e-20,136;CL:0000763,5.65e-16,108;CL:0000049,5.65e-16,108;CL:0000988,8.51e-15,177;CL:0000037,9.74e-15,168;CL:0002032,4.25e-14,161;CL:0000837,4.25e-14,161;CL:0002393,2.12e-07,9;CL:0002397,2.12e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.19e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.78e-16!80;UBERON:0002405!4.07e-15!115;UBERON:0002390!9.71e-15!102;UBERON:0003061!9.71e-15!102;UBERON:0001474!1.31e-14!86;UBERON:0002193!3.01e-13!112;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.84e-27,76;UBERON:0002390,8.02e-24,98;UBERON:0003061,8.02e-24,98;UBERON:0001474,9.80e-24,82;UBERON:0002405,5.44e-20,93;UBERON:0004765,8.21e-20,90;UBERON:0002193,1.58e-19,108;UBERON:0001434,2.05e-17,100 | |||
|phase1_expression=1.63510541343501,1.49870366723688,1.55049844505568,1.0007329835313,3.12872766099101,0.872338524100369,0,1.26343974685366,3.13422753839806,0.491467873003018,2.79120467188971,0,0,0.618831764800233,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.369363174230364,0.408001382488506,0,0,0,0.125542639594803,0.152826811495903,0,0,7.08055698328027,4.98978217526377,2.63187409637329,0,0.30120591877825,0,1.23947520928483,0,1.76160263600908,3.32397245119126,2.00544447470142,2.82114131930607,2.91090116511902,2.26725566213286,4.37878464978117,7.4153101777578,5.66813915533214,9.21819432513701,11.6214518452842,13.9797081927421,8.981484755958,12.9461576544968,8.70946402198942,13.9524515634265,6.20542225325913,3.87290810150296,12.1883837934908,6.21199720490596,10.3704337021981,8.09004544002305,9.48860066349798,11.5534449747394,10.2293940127847,11.8746468067218,8.7764009353518,8.52449501065388,8.9964863974861,9.64554881974938,11.2108004819203,11.5574386018102,9.38669253156363,10.6422533905507,6.65939452896706,9.57521853567668,7.91155968602211,2.5350634357433,1.27562579979026,2.09658645508376,1.90958672949042,1.20141514273205,2.08943262706204,4.84521664360123,2.98375015798635,2.73996230646951,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,3.98449078376614,2.93618594685469,4.20500550937752,0,1.68152568894461,0.790152254325231,1.37696839079683,1.17903228824749,1.85041349099558,0.501559486172034,0.32592226663359,1.4203434172042,0,0.222820913770347,2.06224135232386,1.10766947291811,1.35401931882508,0,0.260118695119756,0.328875809207352,0,0,0.444859689486181,0.267540828089713,0,0.226618685395132,1.14966148080576,2.06176467289578,2.27717722817553,1.27426165729639,0,0,0.451725357233318,0.127986611154418,1.24930726552346,0.236777252044017,1.64225599384209,1.00803371612366,1.33720097891754,2.17236605824198,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,1.73815822752988,0.795285947051099,0,0.378139268656271,0,0.43917392846563,1.37528029272598,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0.39752481473341,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0.446498641420399,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0.12663051166458,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0.605429710579726,1.15235184896,0,0.624320153660641,0,0.597794722207204,0,0.323745888736263,0.140450806702248,0.204154171254893,0,0.413303124703062,0,0.494533858557114,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.358779271377724,1.06778694409284,0.635795703478686,0,0.824420233907511,0.515281080091258,0.558350568994769,0,0.0974370051611986,0,1.01254888506529,0,0.355009592516614,0.201504196455281,0,1.15956511897978,0.272746120590835,0.860413786167011,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,2.78620756819187,3.60939740834793,0.354920400119532,0.674338760312407,0,0.330881918197182,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0,0,1.40241773803446,0.4115740113314,0,3.80265104465493,7.86261773342101,1.18157981336281,0.441463099414651,2.21379189377604,0.171567810298526,0.329250856225877,0,0.100528972411631,0.462942225792648,0.325808305310325,0,0,0.811512834825538,0.469634776943287,0.144366447761074,0.462985512576611,0.570762456703795,0,0.858486162094873,0.492434012174795,0.702012795417713,0.891786973732369,0,0.16798212819886,0.283550194484773,0.268675568108545,0,0,0.492663237895943,0.352193736052904,0.621984346622316,1.00883967391873,1.13618190083742,0.825472625798197,0.763976851116555,0,1.71072446022705,0.102827492703324,0.901029173531752,0.857479297891735,0.336393253036082,0.43596006883328,0.36669142910475,1.55126058909333,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0,0.285955987316295,1.62786481617433,0,0,0.710783897485092,0,1.50719688529793,0,0.899756920638513,6.08118903205952,3.51579964002488,2.10833939483032,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.358121926479791,1.12085143993527,0.985153801009636,3.01878604803324,1.79680250791648,3.30323011489202,1.30139853857622,2.31986643833309,1.34013012267479,4.46557126157214,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.623912584592421,0.356857977594324,0.788512075169673,0,0.601892199455438,0,0,0,0,0.347534457872331,0.195801157462741,0.343143423810856,1.6541442089831,1.72571360654893,0.74709290462411,0.303127571446259,0,0.30239029332968,0.744323423456331,0.306923946576125,0,1.15325234330131,0.511707249066704,0.321707842287215,0,0.154209693802656,0.532685175939381,0.328508624055237,0,0.116210378459959,3.14234568938218,0.200506470303285,0.828728900423067,0.34444334449382,0,0.262248829918848,0,0.385076685522074,0,1.46139224653261,0.211103257785751,1.13733384070897,0.170093705276516,0.647747748306418,0,0.270946437543853,0,0,0.831076008928724,0.44774950944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| ||
|short_description=p3@VMA21 | |short_description=p3@VMA21 | ||
}} | }} |
Latest revision as of 22:27, 19 September 2015
Short description: | p3@VMA21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VMA21_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -389bp_to_NM_001017980_5end |
EntrezGene: | VMA21 |
HGNC: | 22082 |
UniProt: | Q3ZAQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.48e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.48e-39 | 42 |
defensive cell | 1.07e-37 | 48 |
phagocyte | 1.07e-37 | 48 |
monopoietic cell | 4.81e-32 | 59 |
monocyte | 4.81e-32 | 59 |
monoblast | 4.81e-32 | 59 |
promonocyte | 4.81e-32 | 59 |
macrophage dendritic cell progenitor | 2.43e-30 | 61 |
granulocyte monocyte progenitor cell | 6.44e-29 | 67 |
myeloid leukocyte | 8.72e-29 | 72 |
myeloid lineage restricted progenitor cell | 1.57e-28 | 66 |
nongranular leukocyte | 1.36e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.60e-20 | 120 |
leukocyte | 8.00e-20 | 136 |
myeloid cell | 5.65e-16 | 108 |
common myeloid progenitor | 5.65e-16 | 108 |
hematopoietic cell | 8.51e-15 | 177 |
hematopoietic stem cell | 9.74e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.25e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.25e-14 | 161 |
intermediate monocyte | 2.12e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.12e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.84e-27 | 76 |
hematopoietic system | 8.02e-24 | 98 |
blood island | 8.02e-24 | 98 |
bone element | 9.80e-24 | 82 |
immune system | 5.44e-20 | 93 |
skeletal element | 8.21e-20 | 90 |
hemolymphoid system | 1.58e-19 | 108 |
skeletal system | 2.05e-17 | 100 |