FFCP PHASE1:Hg19::chr1:203154342..203154363,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt=Q59FK1 | |UniProt=Q59FK1 | ||
|association_with_transcript=-37bp_to_AB209459_5end | |association_with_transcript=-37bp_to_AB209459_5end | ||
|cluster_id=chr1:203154342..203154363,- | |||
|coexpression_cluster_id=C283 | |coexpression_cluster_id=C283 | ||
|description=CAGE_peak_9_at_CHI3L1_5end | |description=CAGE_peak_9_at_CHI3L1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000153!6.35e-13!9;CL:0000447!6.35e-13!9;CL:0000667!1.82e-10!6;CL:0000058!1.82e-10!6;CL:0000138!1.82e-10!6;CL:0000135!3.41e-08!3;CL:0000386!3.41e-08!3;CL:0000388!3.41e-08!3;CL:0000327!8.28e-08!14;CL:0000188!2.18e-07!9;CL:0000499!4.00e-07!27 | |ontology_enrichment_celltype=CL:0000153!6.35e-13!9;CL:0000447!6.35e-13!9;CL:0000667!1.82e-10!6;CL:0000058!1.82e-10!6;CL:0000138!1.82e-10!6;CL:0000135!3.41e-08!3;CL:0000386!3.41e-08!3;CL:0000388!3.41e-08!3;CL:0000327!8.28e-08!14;CL:0000188!2.18e-07!9;CL:0000499!4.00e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.81e-45;9!CL:0000447;2.81e-45;9!CL:0000138;2.43e-35;6!CL:0000499;1.53e-28;28!CL:0000327;6.48e-27;15!CL:0000135;8.78e-26;3!CL:0000388;8.78e-26;3!CL:0000235;2.17e-13;6!CL:0000214;3.67e-12;3!CL:0000151;7.44e-09;36 | |ontology_enrichment_celltype_v019=CL:0000153;2.81e-45;9!CL:0000447;2.81e-45;9!CL:0000138;2.43e-35;6!CL:0000499;1.53e-28;28!CL:0000327;6.48e-27;15!CL:0000135;8.78e-26;3!CL:0000388;8.78e-26;3!CL:0000235;2.17e-13;6!CL:0000214;3.67e-12;3!CL:0000151;7.44e-09;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.24e-45,9;CL:0000447,2.24e-45,9;CL:0000058,2.43e-35,6;CL:0000138,2.43e-35,6;CL:0000499,1.30e-28,28;CL:0000327,5.66e-27,15;CL:0000135,7.41e-26,3;CL:0000388,7.41e-26,3;CL:0000235,2.12e-13,6;CL:0000214,3.01e-12,3;CL:0000151,8.29e-11,36 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.08e-09;1!UBERON:0004161;2.31e-07;11 | |ontology_enrichment_development_v019=UBERON:0010115;2.08e-09;1!UBERON:0004161;2.31e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;7.83e-10;1 | |ontology_enrichment_disease_v019=DOID:5662;7.83e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,8.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.14e-18!57;UBERON:0005068!3.14e-18!57;UBERON:0006241!3.14e-18!57;UBERON:0007135!3.14e-18!57;UBERON:0002020!4.40e-18!34;UBERON:0003528!4.40e-18!34;UBERON:0001893!1.07e-17!34;UBERON:0002780!2.83e-17!41;UBERON:0001890!2.83e-17!41;UBERON:0006240!2.83e-17!41;UBERON:0007023!3.04e-17!115;UBERON:0003080!9.83e-17!42;UBERON:0002791!1.60e-16!33;UBERON:0002616!8.52e-16!59;UBERON:0001869!3.66e-15!32;UBERON:0001017!6.45e-15!82;UBERON:0000955!9.29e-15!69;UBERON:0006238!9.29e-15!69;UBERON:0002308!2.79e-14!9;UBERON:0000125!2.79e-14!9;UBERON:0005743!7.30e-14!86;UBERON:0003075!6.64e-13!86;UBERON:0007284!6.64e-13!86;UBERON:0002346!5.39e-12!90;UBERON:0000073!7.94e-12!94;UBERON:0001016!7.94e-12!94;UBERON:0002420!4.94e-11!9;UBERON:0007245!4.94e-11!9;UBERON:0010009!4.94e-11!9;UBERON:0010011!4.94e-11!9;UBERON:0000454!4.94e-11!9;UBERON:0001950!6.40e-11!20;UBERON:0003056!6.41e-11!61;UBERON:0009663!8.66e-11!7;UBERON:0002619!9.71e-10!22;UBERON:0000956!2.58e-08!25;UBERON:0000203!2.58e-08!25;UBERON:0000043!3.41e-08!3;UBERON:0000200!5.59e-08!6;UBERON:0006331!4.93e-07!3;UBERON:0002771!8.13e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.14e-18!57;UBERON:0005068!3.14e-18!57;UBERON:0006241!3.14e-18!57;UBERON:0007135!3.14e-18!57;UBERON:0002020!4.40e-18!34;UBERON:0003528!4.40e-18!34;UBERON:0001893!1.07e-17!34;UBERON:0002780!2.83e-17!41;UBERON:0001890!2.83e-17!41;UBERON:0006240!2.83e-17!41;UBERON:0007023!3.04e-17!115;UBERON:0003080!9.83e-17!42;UBERON:0002791!1.60e-16!33;UBERON:0002616!8.52e-16!59;UBERON:0001869!3.66e-15!32;UBERON:0001017!6.45e-15!82;UBERON:0000955!9.29e-15!69;UBERON:0006238!9.29e-15!69;UBERON:0002308!2.79e-14!9;UBERON:0000125!2.79e-14!9;UBERON:0005743!7.30e-14!86;UBERON:0003075!6.64e-13!86;UBERON:0007284!6.64e-13!86;UBERON:0002346!5.39e-12!90;UBERON:0000073!7.94e-12!94;UBERON:0001016!7.94e-12!94;UBERON:0002420!4.94e-11!9;UBERON:0007245!4.94e-11!9;UBERON:0010009!4.94e-11!9;UBERON:0010011!4.94e-11!9;UBERON:0000454!4.94e-11!9;UBERON:0001950!6.40e-11!20;UBERON:0003056!6.41e-11!61;UBERON:0009663!8.66e-11!7;UBERON:0002619!9.71e-10!22;UBERON:0000956!2.58e-08!25;UBERON:0000203!2.58e-08!25;UBERON:0000043!3.41e-08!3;UBERON:0000200!5.59e-08!6;UBERON:0006331!4.93e-07!3;UBERON:0002771!8.13e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;8.78e-26;3!UBERON:0000043;8.78e-26;3!UBERON:0007845;8.78e-26;3!UBERON:0006915;3.67e-12;3!UBERON:0007616;3.67e-12;3!UBERON:0002217;3.67e-12;3!UBERON:0002018;3.67e-12;3!UBERON:0001282;1.31e-09;1!UBERON:0009842;1.31e-09;1!UBERON:0003704;1.31e-09;1!UBERON:0001171;1.31e-09;1!UBERON:0001172;1.31e-09;1!UBERON:0002363;2.08e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0007846;8.78e-26;3!UBERON:0000043;8.78e-26;3!UBERON:0007845;8.78e-26;3!UBERON:0006915;3.67e-12;3!UBERON:0007616;3.67e-12;3!UBERON:0002217;3.67e-12;3!UBERON:0002018;3.67e-12;3!UBERON:0001282;1.31e-09;1!UBERON:0009842;1.31e-09;1!UBERON:0003704;1.31e-09;1!UBERON:0001171;1.31e-09;1!UBERON:0001172;1.31e-09;1!UBERON:0002363;2.08e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,7.41e-26,3;UBERON:0000043,7.41e-26,3;UBERON:0007845,7.41e-26,3;UBERON:0006915,3.01e-12,3;UBERON:0007616,3.01e-12,3;UBERON:0002217,3.01e-12,3;UBERON:0002018,3.01e-12,3;UBERON:0001282,1.15e-09,1;UBERON:0009842,1.15e-09,1;UBERON:0003704,1.15e-09,1;UBERON:0001171,1.15e-09,1;UBERON:0001172,1.15e-09,1;UBERON:0002363,2.26e-09,1;UBERON:0007645,2.26e-09,1;UBERON:0007647,2.26e-09,1;UBERON:0010115,2.26e-09,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.53007406669196,10.5280961233537,6.95263291011954,11.1340032587154,7.78615792484217,0,0,0.087834785693126,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.492434012174795,10.9982004615442,6.39113997841531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.616194468458578,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8220275766692,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,1.22896305723383,0.894704431569664,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0.438770794307945,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0.129282956361551,0.92562821219883,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,1.14681839138014,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.757612021100357,9.55958026659785,3.55924488638614,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,6.00208033030965,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,4.46394021800102,39.747104062302,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,2.53007406669196,10.5280961233537,6.95263291011954,11.1340032587154,7.78615792484217,0,0,0.087834785693126,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0.492434012174795,10.9982004615442,6.39113997841531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.616194468458578,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8220275766692,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,1.22896305723383,0.894704431569664,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0.438770794307945,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.20054501294127,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866851769704557,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,0,0.129282956361551,0.92562821219883,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,1.14681839138014,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.757612021100357,9.55958026659785,3.55924488638614,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,6.00208033030965,0,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,4.46394021800102,39.747104062302,1.73050624849516,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@CHI3L1 | |short_description=p9@CHI3L1 | ||
}} | }} |
Latest revision as of 22:24, 19 September 2015
Short description: | p9@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -37bp_to_AB209459_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | Q59FK1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.24e-45 | 9 |
carbohydrate secreting cell | 2.24e-45 | 9 |
chondroblast | 2.43e-35 | 6 |
chondrocyte | 2.43e-35 | 6 |
stromal cell | 1.30e-28 | 28 |
extracellular matrix secreting cell | 5.66e-27 | 15 |
fibrocyte | 7.41e-26 | 3 |
tendon cell | 7.41e-26 | 3 |
macrophage | 2.12e-13 | 6 |
synovial cell | 3.01e-12 | 3 |
secretory cell | 8.29e-11 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 7.41e-26 | 3 |
tendon | 7.41e-26 | 3 |
regular connective tissue | 7.41e-26 | 3 |
stratified squamous epithelium | 3.01e-12 | 3 |
layer of synovial tissue | 3.01e-12 | 3 |
synovial joint | 3.01e-12 | 3 |
synovial membrane of synovial joint | 3.01e-12 | 3 |
intralobular bile duct | 1.15e-09 | 1 |
acinus | 1.15e-09 | 1 |
intrahepatic bile duct | 1.15e-09 | 1 |
portal lobule | 1.15e-09 | 1 |
hepatic acinus | 1.15e-09 | 1 |
dura mater | 2.26e-09 | 1 |
future meninx | 2.26e-09 | 1 |
ectomeninx | 2.26e-09 | 1 |
future dura mater | 2.26e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 8.91e-10 | 1 |