FFCP PHASE1:Hg19::chr3:120461353..120461374,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:120461353..120461374,- to FFCP PHASE1:Hg19::chr3:120461353..120461374,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285282 | |EntrezGene=285282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18072 | |HGNC=18072 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDC7,C9JXM3,F8WAX9 | |UniProt=F8WDC7,C9JXM3,F8WAX9 | ||
|association_with_transcript=0bp_to_ENST00000465022,ENST00000483733,ENST00000485161_5end | |||
|cluster_id=chr3:120461353..120461374,- | |||
|description=CAGE_peak_1_at_RABL3_5end | |||
|id=chr3:120461353..120461374,- | |||
|ontology_enrichment_celltype=CL:0000542!1.52e-07!53;CL:0000051!1.52e-07!53;CL:0000838!4.27e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.52e-07,53;CL:0000051,1.52e-07,53;CL:0000838,4.27e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.71e-13!115;UBERON:0001049!2.04e-08!57;UBERON:0005068!2.04e-08!57;UBERON:0006241!2.04e-08!57;UBERON:0007135!2.04e-08!57;UBERON:0002780!1.00e-07!41;UBERON:0001890!1.00e-07!41;UBERON:0006240!1.00e-07!41;UBERON:0003080!2.17e-07!42;UBERON:0002616!2.52e-07!59;UBERON:0005743!2.83e-07!86;UBERON:0001017!5.81e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.87e-13,114;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0000073,3.09e-08,53;UBERON:0002616,3.09e-08,53;UBERON:0002780,1.00e-07,41;UBERON:0001890,1.00e-07,41;UBERON:0003080,1.00e-07,41;UBERON:0006240,1.00e-07,41;UBERON:0001017,3.66e-07,81 | |||
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| ||
|short_description=p1@RABL3 | |||
}} | }} |
Latest revision as of 22:23, 19 September 2015
Short description: | p1@RABL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RABL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465022, ENST00000483733, ENST00000485161_5end |
EntrezGene: | RABL3 |
HGNC: | 18072 |
UniProt: | F8WDC7C9JXM3F8WAX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.52e-07 | 53 |
common lymphoid progenitor | 1.52e-07 | 53 |
lymphoid lineage restricted progenitor cell | 4.27e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.87e-13 | 114 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
regional part of nervous system | 3.09e-08 | 53 |
regional part of brain | 3.09e-08 | 53 |
regional part of forebrain | 1.00e-07 | 41 |
forebrain | 1.00e-07 | 41 |
anterior neural tube | 1.00e-07 | 41 |
future forebrain | 1.00e-07 | 41 |
central nervous system | 3.66e-07 | 81 |