FFCP PHASE1:Hg19::chr3:120401033..120401040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3081 | |EntrezGene=3081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4892 | |HGNC=4892 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_,49bp_to_ENST00000466528,ENST00000488183_5end | |association_with_transcript=-49bp_to_,49bp_to_ENST00000466528,ENST00000488183_5end | ||
|cluster_id=chr3:120401033..120401040,- | |||
|description=CAGE_peak_3_at_HGD_5end | |description=CAGE_peak_3_at_HGD_5end | ||
|id=chr3:120401033..120401040,- | |id=chr3:120401033..120401040,- | ||
|ontology_enrichment_celltype=CL:0000159!5.26e-10!2;CL:0000181!2.95e-09!12;CL:0000417!2.95e-09!12;CL:0000668!2.95e-09!12;CL:0000414!2.95e-09!12;CL:0000412!2.95e-09!12;CL:0000182!2.95e-09!12 | |ontology_enrichment_celltype=CL:0000159!5.26e-10!2;CL:0000181!2.95e-09!12;CL:0000417!2.95e-09!12;CL:0000668!2.95e-09!12;CL:0000414!2.95e-09!12;CL:0000412!2.95e-09!12;CL:0000182!2.95e-09!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.55e-18;5!UBERON:0003918;8.27e-10;10!UBERON:0007687;8.27e-10;10!UBERON:0003104;2.63e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.07e-10!106;DOID:4468!1.46e-10!2;DOID:299!2.60e-10!25;DOID:0050687!8.68e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.37e-44;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.53e-44,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.70e-15!55;UBERON:0005173!5.70e-15!55;UBERON:0003929!2.87e-13!54;UBERON:0009497!3.58e-13!25;UBERON:0000015!3.58e-13!25;UBERON:0002423!3.58e-13!25;UBERON:0006235!3.58e-13!25;UBERON:0004161!3.58e-13!25;UBERON:0002417!3.65e-13!61;UBERON:0000916!3.65e-13!61;UBERON:0008835!4.04e-12!22;UBERON:0003894!4.04e-12!22;UBERON:0009854!1.55e-11!23;UBERON:0002368!3.59e-11!35;UBERON:0002107!6.31e-11!19;UBERON:0006925!6.31e-11!19;UBERON:0008836!6.31e-11!19;UBERON:0007499!1.66e-10!25;UBERON:0005911!2.52e-10!82;UBERON:0009856!4.73e-10!26;UBERON:0000341!5.50e-10!2;UBERON:0005177!2.59e-09!107;UBERON:0002046!7.65e-09!5;UBERON:0004117!7.65e-09!5;UBERON:0007689!7.65e-09!5;UBERON:0007123!7.65e-09!5;UBERON:0003091!7.65e-09!5;UBERON:0009569!1.31e-08!113;UBERON:0002530!1.55e-08!59;UBERON:0000949!2.91e-08!45;UBERON:0002365!3.36e-08!31;UBERON:0002330!3.36e-08!31;UBERON:0005057!1.02e-07!26;UBERON:0002113!3.34e-07!27;UBERON:0003918!3.34e-07!27;UBERON:0005095!3.34e-07!27;UBERON:0007687!3.34e-07!27;UBERON:0001007!8.87e-07!155;UBERON:0001555!8.87e-07!155;UBERON:0007026!8.87e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.55e-18;5!UBERON:0000341;2.07e-12;2!UBERON:0002368;3.28e-10;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.35e-18,5;UBERON:0004117,1.35e-18,5;UBERON:0007689,1.35e-18,5;UBERON:0007123,1.35e-18,5;UBERON:0003091,1.35e-18,5;UBERON:0000341,2.32e-12,2;UBERON:0002368,1.66e-10,35;UBERON:0009722,5.41e-09,11;UBERON:0007690,5.41e-09,11;UBERON:0000949,3.00e-08,45;UBERON:0003929,6.31e-07,54;UBERON:0005172,6.31e-07,54;UBERON:0005173,6.31e-07,54 | |||
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| ||
|short_description=p3@HGD | |short_description=p3@HGD | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p3@HGD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HGD_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_, 49bp_to_ENST00000466528, ENST00000488183_5end |
EntrezGene: | HGD |
HGNC: | 4892 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.35e-18 | 5 |
pharyngeal pouch | 1.35e-18 | 5 |
thyroid diverticulum | 1.35e-18 | 5 |
pharyngeal pouch 2 | 1.35e-18 | 5 |
thyroid primordium | 1.35e-18 | 5 |
throat | 2.32e-12 | 2 |
endocrine gland | 1.66e-10 | 35 |
entire pharyngeal arch endoderm | 5.41e-09 | 11 |
early pharyngeal endoderm | 5.41e-09 | 11 |
endocrine system | 3.00e-08 | 45 |
gut epithelium | 6.31e-07 | 54 |
abdomen element | 6.31e-07 | 54 |
abdominal segment element | 6.31e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.53e-44 | 2 |