FFCP PHASE1:Hg19::chr6:79787964..79787994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55023 | |EntrezGene=55023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15673 | |HGNC=15673 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWQ0 | |UniProt=Q8WWQ0 | ||
|association_with_transcript=-11bp_to_ENST00000275034_5end | |association_with_transcript=-11bp_to_ENST00000275034_5end | ||
|cluster_id=chr6:79787964..79787994,- | |||
|coexpression_cluster_id=C3712 | |||
|description=CAGE_peak_2_at_PHIP_5end | |description=CAGE_peak_2_at_PHIP_5end | ||
|id=chr6:79787964..79787994,- | |id=chr6:79787964..79787994,- | ||
|ontology_enrichment_celltype=CL:0000037!1.46e-35!172;CL:0000566!1.46e-35!172;CL:0000738!8.13e-35!140;CL:0002032!5.29e-33!165;CL:0000837!5.29e-33!165;CL:0000988!1.73e-30!182;CL:0002031!3.88e-29!124;CL:0002087!1.33e-27!119;CL:0000763!2.35e-25!112;CL:0000049!2.35e-25!112;CL:0000766!1.77e-24!76;CL:0000557!1.63e-22!71;CL:0002057!3.02e-22!42;CL:0000860!4.35e-22!45;CL:0000839!1.18e-21!70;CL:0002009!6.45e-21!65;CL:0002194!6.26e-20!63;CL:0000576!6.26e-20!63;CL:0000040!6.26e-20!63;CL:0000559!6.26e-20!63;CL:0000838!1.45e-07!52;CL:0000542!2.15e-07!53;CL:0000051!2.15e-07!53 | |ontology_enrichment_celltype=CL:0000037!1.46e-35!172;CL:0000566!1.46e-35!172;CL:0000738!8.13e-35!140;CL:0002032!5.29e-33!165;CL:0000837!5.29e-33!165;CL:0000988!1.73e-30!182;CL:0002031!3.88e-29!124;CL:0002087!1.33e-27!119;CL:0000763!2.35e-25!112;CL:0000049!2.35e-25!112;CL:0000766!1.77e-24!76;CL:0000557!1.63e-22!71;CL:0002057!3.02e-22!42;CL:0000860!4.35e-22!45;CL:0000839!1.18e-21!70;CL:0002009!6.45e-21!65;CL:0002194!6.26e-20!63;CL:0000576!6.26e-20!63;CL:0000040!6.26e-20!63;CL:0000559!6.26e-20!63;CL:0000838!1.45e-07!52;CL:0000542!2.15e-07!53;CL:0000051!2.15e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-16;33!CL:0002057;1.07e-16;33!CL:0000576;1.32e-14;48!CL:0000473;1.16e-12;39!CL:0000234;1.16e-12;39!CL:0000766;9.23e-12;69!CL:0002087;1.49e-09;104!CL:0000738;1.53e-08;136!CL:0000763;6.93e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.54e-36,168;CL:0000738,2.96e-35,136;CL:0002032,2.76e-33,161;CL:0000837,2.76e-33,161;CL:0000988,2.09e-31,177;CL:0002031,1.45e-29,120;CL:0002087,4.99e-28,115;CL:0000763,8.97e-26,108;CL:0000049,8.97e-26,108;CL:0000766,3.19e-25,72;CL:0000557,3.00e-23,67;CL:0000839,2.29e-22,66;CL:0000860,3.01e-22,42;CL:0002057,3.01e-22,42;CL:0002009,1.13e-21,61;CL:0002194,1.14e-20,59;CL:0000576,1.14e-20,59;CL:0000040,1.14e-20,59;CL:0000559,1.14e-20,59;CL:0000473,2.45e-20,48;CL:0000234,2.45e-20,48;CL:0000838,1.45e-07,52;CL:0000542,2.15e-07,53;CL:0000051,2.15e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-16;42!CL:0000049;8.42e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.24e-21!102;UBERON:0003061!6.24e-21!102;UBERON:0002193!7.41e-18!112;UBERON:0002371!1.27e-17!80;UBERON:0001474!6.96e-17!86;UBERON:0007023!4.11e-16!115;UBERON:0004765!2.27e-12!101;UBERON:0001434!2.27e-12!101;UBERON:0002405!4.54e-10!115;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0001017!3.70e-09!82;UBERON:0000073!1.02e-08!94;UBERON:0001016!1.02e-08!94;UBERON:0005743!1.67e-08!86;UBERON:0002616!2.11e-08!59;UBERON:0000955!2.51e-07!69;UBERON:0006238!2.51e-07!69;UBERON:0003080!3.08e-07!42;UBERON:0002780!4.57e-07!41;UBERON:0001890!4.57e-07!41;UBERON:0006240!4.57e-07!41 | |ontology_enrichment_uberon=UBERON:0002390!6.24e-21!102;UBERON:0003061!6.24e-21!102;UBERON:0002193!7.41e-18!112;UBERON:0002371!1.27e-17!80;UBERON:0001474!6.96e-17!86;UBERON:0007023!4.11e-16!115;UBERON:0004765!2.27e-12!101;UBERON:0001434!2.27e-12!101;UBERON:0002405!4.54e-10!115;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0001017!3.70e-09!82;UBERON:0000073!1.02e-08!94;UBERON:0001016!1.02e-08!94;UBERON:0005743!1.67e-08!86;UBERON:0002616!2.11e-08!59;UBERON:0000955!2.51e-07!69;UBERON:0006238!2.51e-07!69;UBERON:0003080!3.08e-07!42;UBERON:0002780!4.57e-07!41;UBERON:0001890!4.57e-07!41;UBERON:0006240!4.57e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.66e-21,98;UBERON:0003061,2.66e-21,98;UBERON:0002193,4.40e-18,108;UBERON:0002371,4.72e-18,76;UBERON:0001474,3.05e-17,82;UBERON:0007023,6.12e-16,114;UBERON:0002405,3.38e-15,93;UBERON:0004765,8.40e-14,90;UBERON:0001434,1.03e-11,100;UBERON:0001016,3.60e-09,89;UBERON:0001049,4.37e-09,56;UBERON:0005068,4.37e-09,56;UBERON:0006241,4.37e-09,56;UBERON:0007135,4.37e-09,56;UBERON:0001017,5.46e-09,81;UBERON:0000073,1.37e-08,53;UBERON:0002616,1.37e-08,53;UBERON:0000955,3.65e-07,68;UBERON:0006238,3.65e-07,68;UBERON:0002780,4.57e-07,41;UBERON:0001890,4.57e-07,41;UBERON:0003080,4.57e-07,41;UBERON:0006240,4.57e-07,41 | |||
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| ||
|short_description=p2@PHIP | |short_description=p2@PHIP | ||
}} | }} |
Latest revision as of 22:11, 19 September 2015
Short description: | p2@PHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHIP_5end |
Coexpression cluster: | C3712_granulocyte_Neutrophils_embryonic_non_Eosinophils_CD19_rectum |
Association with transcript: | -11bp_to_ENST00000275034_5end |
EntrezGene: | PHIP |
HGNC: | 15673 |
UniProt: | Q8WWQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.54e-36 | 168 |
leukocyte | 2.96e-35 | 136 |
hematopoietic oligopotent progenitor cell | 2.76e-33 | 161 |
hematopoietic multipotent progenitor cell | 2.76e-33 | 161 |
hematopoietic cell | 2.09e-31 | 177 |
hematopoietic lineage restricted progenitor cell | 1.45e-29 | 120 |
nongranular leukocyte | 4.99e-28 | 115 |
myeloid cell | 8.97e-26 | 108 |
common myeloid progenitor | 8.97e-26 | 108 |
myeloid leukocyte | 3.19e-25 | 72 |
granulocyte monocyte progenitor cell | 3.00e-23 | 67 |
myeloid lineage restricted progenitor cell | 2.29e-22 | 66 |
classical monocyte | 3.01e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-22 | 42 |
macrophage dendritic cell progenitor | 1.13e-21 | 61 |
monopoietic cell | 1.14e-20 | 59 |
monocyte | 1.14e-20 | 59 |
monoblast | 1.14e-20 | 59 |
promonocyte | 1.14e-20 | 59 |
defensive cell | 2.45e-20 | 48 |
phagocyte | 2.45e-20 | 48 |
lymphoid lineage restricted progenitor cell | 1.45e-07 | 52 |
lymphocyte | 2.15e-07 | 53 |
common lymphoid progenitor | 2.15e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.66e-21 | 98 |
blood island | 2.66e-21 | 98 |
hemolymphoid system | 4.40e-18 | 108 |
bone marrow | 4.72e-18 | 76 |
bone element | 3.05e-17 | 82 |
adult organism | 6.12e-16 | 114 |
immune system | 3.38e-15 | 93 |
skeletal element | 8.40e-14 | 90 |
skeletal system | 1.03e-11 | 100 |
nervous system | 3.60e-09 | 89 |
neural tube | 4.37e-09 | 56 |
neural rod | 4.37e-09 | 56 |
future spinal cord | 4.37e-09 | 56 |
neural keel | 4.37e-09 | 56 |
central nervous system | 5.46e-09 | 81 |
regional part of nervous system | 1.37e-08 | 53 |
regional part of brain | 1.37e-08 | 53 |
brain | 3.65e-07 | 68 |
future brain | 3.65e-07 | 68 |
regional part of forebrain | 4.57e-07 | 41 |
forebrain | 4.57e-07 | 41 |
anterior neural tube | 4.57e-07 | 41 |
future forebrain | 4.57e-07 | 41 |