FFCP PHASE1:Hg19::chr12:6554307..6554320,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=939 | |EntrezGene=939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11922 | |HGNC=11922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-197bp_to_ENST00000541233,uc001qoe.2_5end | |association_with_transcript=-197bp_to_ENST00000541233,uc001qoe.2_5end | ||
|cluster_id=chr12:6554307..6554320,+ | |||
|coexpression_cluster_id=C2232 | |coexpression_cluster_id=C2232 | ||
|description=CAGE_peak_5_at_CD27_5end | |description=CAGE_peak_5_at_CD27_5end | ||
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|ontology_enrichment_celltype=CL:0000838!1.19e-47!52;CL:0000542!1.45e-46!53;CL:0000051!1.45e-46!53;CL:0000791!3.09e-29!18;CL:0000789!3.09e-29!18;CL:0002420!3.09e-29!18;CL:0002419!3.09e-29!18;CL:0000790!3.09e-29!18;CL:0000945!3.70e-23!24;CL:0000826!3.70e-23!24;CL:0000084!1.56e-22!25;CL:0000827!1.56e-22!25;CL:0000625!7.56e-22!11;CL:0002087!3.87e-20!119;CL:0000738!1.05e-16!140;CL:0002031!1.80e-16!124;CL:0000037!9.12e-12!172;CL:0000566!9.12e-12!172;CL:0000624!5.26e-11!6;CL:0000236!8.06e-11!14;CL:0000988!1.35e-10!182;CL:0002032!3.91e-10!165;CL:0000837!3.91e-10!165;CL:0000898!7.56e-09!3;CL:0000785!7.61e-07!2;CL:0000955!7.61e-07!2;CL:0000818!7.61e-07!2;CL:0000954!7.61e-07!2;CL:0000816!7.61e-07!2 | |ontology_enrichment_celltype=CL:0000838!1.19e-47!52;CL:0000542!1.45e-46!53;CL:0000051!1.45e-46!53;CL:0000791!3.09e-29!18;CL:0000789!3.09e-29!18;CL:0002420!3.09e-29!18;CL:0002419!3.09e-29!18;CL:0000790!3.09e-29!18;CL:0000945!3.70e-23!24;CL:0000826!3.70e-23!24;CL:0000084!1.56e-22!25;CL:0000827!1.56e-22!25;CL:0000625!7.56e-22!11;CL:0002087!3.87e-20!119;CL:0000738!1.05e-16!140;CL:0002031!1.80e-16!124;CL:0000037!9.12e-12!172;CL:0000566!9.12e-12!172;CL:0000624!5.26e-11!6;CL:0000236!8.06e-11!14;CL:0000988!1.35e-10!182;CL:0002032!3.91e-10!165;CL:0000837!3.91e-10!165;CL:0000898!7.56e-09!3;CL:0000785!7.61e-07!2;CL:0000955!7.61e-07!2;CL:0000818!7.61e-07!2;CL:0000954!7.61e-07!2;CL:0000816!7.61e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.28e-35;18!CL:0000789;6.28e-35;18!CL:0002419;6.28e-35;18!CL:0000625;6.98e-26;11!CL:0000084;1.82e-24;25!CL:0000542;5.74e-17;53!CL:0000898;5.67e-15;3!CL:0000624;6.85e-13;6!CL:0000945;9.81e-12;24!CL:0000815;1.11e-10;2!CL:0000792;1.11e-10;2!CL:0002677;1.11e-10;2 | |ontology_enrichment_celltype_v019=CL:0000791;6.28e-35;18!CL:0000789;6.28e-35;18!CL:0002419;6.28e-35;18!CL:0000625;6.98e-26;11!CL:0000084;1.82e-24;25!CL:0000542;5.74e-17;53!CL:0000898;5.67e-15;3!CL:0000624;6.85e-13;6!CL:0000945;9.81e-12;24!CL:0000815;1.11e-10;2!CL:0000792;1.11e-10;2!CL:0002677;1.11e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.04e-35,18;CL:0000789,4.04e-35,18;CL:0002420,4.04e-35,18;CL:0002419,4.04e-35,18;CL:0000790,4.04e-35,18;CL:0000838,7.12e-32,52;CL:0000542,3.47e-31,53;CL:0000051,3.47e-31,53;CL:0000625,4.37e-26,11;CL:0000084,1.34e-24,25;CL:0000827,1.34e-24,25;CL:0000898,5.43e-15,3;CL:0000624,6.77e-13,6;CL:0002087,8.65e-12,115;CL:0000945,1.12e-11,24;CL:0000826,1.12e-11,24;CL:0000785,2.59e-11,2;CL:0000955,2.59e-11,2;CL:0000818,2.59e-11,2;CL:0000954,2.59e-11,2;CL:0000816,2.59e-11,2;CL:0002031,4.03e-11,120;CL:0000815,6.67e-11,2;CL:0000792,6.67e-11,2;CL:0002677,6.67e-11,2;CL:0000738,2.58e-09,136;CL:0000236,1.41e-08,14;CL:0000817,8.24e-08,3;CL:0002032,3.17e-07,161;CL:0000837,3.17e-07,161;CL:0000037,9.35e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;6.28e-35;18!CL:0000051;5.74e-17;53!CL:0000954;2.78e-11;2 | |ontology_enrichment_development_v019=CL:0000790;6.28e-35;18!CL:0000051;5.74e-17;53!CL:0000954;2.78e-11;2 | ||
|ontology_enrichment_disease=DOID:0060058!1.14e-08!10 | |ontology_enrichment_disease=DOID:0060058!1.14e-08!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.39e-11!7;UBERON:0000178!1.88e-09!15;UBERON:0000179!1.88e-09!15;UBERON:0000463!1.88e-09!15;UBERON:0002106!2.26e-07!3;UBERON:0004854!2.26e-07!3;UBERON:0009034!2.26e-07!3;UBERON:0002095!2.26e-07!3;UBERON:0004782!2.26e-07!3;UBERON:0003281!2.26e-07!3;UBERON:0009664!2.26e-07!3;UBERON:0002296!2.26e-07!3;UBERON:0005602!2.26e-07!3;UBERON:0001179!2.26e-07!3;UBERON:0006293!2.26e-07!3 | |ontology_enrichment_uberon=UBERON:0004177!1.39e-11!7;UBERON:0000178!1.88e-09!15;UBERON:0000179!1.88e-09!15;UBERON:0000463!1.88e-09!15;UBERON:0002106!2.26e-07!3;UBERON:0004854!2.26e-07!3;UBERON:0009034!2.26e-07!3;UBERON:0002095!2.26e-07!3;UBERON:0004782!2.26e-07!3;UBERON:0003281!2.26e-07!3;UBERON:0009664!2.26e-07!3;UBERON:0002296!2.26e-07!3;UBERON:0005602!2.26e-07!3;UBERON:0001179!2.26e-07!3;UBERON:0006293!2.26e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@CD27 | |short_description=p5@CD27 | ||
}} | }} |
Latest revision as of 22:11, 19 September 2015
Short description: | p5@CD27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD27_5end |
Coexpression cluster: | C2232_lymphangiectasia_CD4_diffuse_Burkitt_lymphoma_plasma_tonsil |
Association with transcript: | -197bp_to_ENST00000541233, uc001qoe.2_5end |
EntrezGene: | CD27 |
HGNC: | 11922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data