FFCP PHASE1:Hg19::chr6:112575434..112575448,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:112575434..112575448,- to FFCP PHASE1:Hg19::chr6:112575434..112575448,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3910 | |EntrezGene=3910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6484 | |HGNC=6484 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFQ2 | |UniProt=E5RFQ2 | ||
|association_with_transcript=238bp_to_ENST00000521398_5end | |||
|cluster_id=chr6:112575434..112575448,- | |||
|coexpression_cluster_id=C4546 | |||
|description=CAGE_peak_9_at_LAMA4_5end | |||
|id=chr6:112575434..112575448,- | |||
|ontology_enrichment_celltype=CL:0000055!4.87e-17!180;CL:0000057!3.68e-16!75;CL:0000136!8.61e-11!15;CL:0002620!4.40e-08!23;CL:0000222!2.52e-07!119;CL:0002334!8.22e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.43e-45;13!CL:0002521;5.29e-14;3!CL:0002615;6.74e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.63e-39,15;CL:0002521,5.13e-14,3;CL:0002615,1.59e-12,3;CL:0000048,4.69e-07,427;CL:0000723,7.78e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!1.04e-09!45;UBERON:0002416!1.04e-09!45;UBERON:0003102!1.28e-09!95;UBERON:0000914!6.95e-09!83;UBERON:0002329!6.95e-09!83;UBERON:0003077!6.95e-09!83;UBERON:0003059!6.95e-09!83;UBERON:0007282!6.95e-09!83;UBERON:0009618!6.95e-09!83;UBERON:0007285!6.95e-09!83;UBERON:0002049!9.91e-09!79;UBERON:0007798!9.91e-09!79;UBERON:0004290!3.58e-08!70;UBERON:0002385!1.22e-07!63;UBERON:0001015!1.22e-07!63;UBERON:0000383!1.22e-07!63;UBERON:0001009!1.86e-07!113;UBERON:0002097!3.01e-07!40;UBERON:0001134!4.88e-07!61;UBERON:0002036!4.88e-07!61;UBERON:0003082!4.88e-07!61;UBERON:0000486!5.01e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.29e-14;3!UBERON:0001013;1.12e-13;14!UBERON:0003688;4.97e-11;6!UBERON:0002358;4.97e-11;6!UBERON:0003684;4.97e-11;6!UBERON:0001178;4.97e-11;6!UBERON:0005406;6.46e-09;2!UBERON:0002072;1.46e-08;5!UBERON:0004457;2.27e-07;9!UBERON:0000042;2.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,5.13e-14,3;UBERON:0001013,7.19e-14,14;UBERON:0003688,9.90e-11,6;UBERON:0002358,9.90e-11,6;UBERON:0003684,9.90e-11,6;UBERON:0001178,9.90e-11,6;UBERON:0005406,2.33e-09,2;UBERON:0002072,1.44e-08,5 | |||
|phase1_expression=0.908391896352783,2.5692062866918,1.26858963686374,1.0007329835313,2.23480547213644,1.74467704820074,7.59899634504932,2.52687949370732,7.83556884599516,0.245733936501509,0,0,0,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0.434539556882471,2.3858578411533,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,1.55050055501597,1.42306505074684,1.00416183829401,0,0,0,0.367663080345869,1.62028389576352,0.357198913136319,0.898117490504679,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.506522046658319,1.98613771219828,2.29469296599051,0,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.326923806226917,0.605429710579726,1.15235184896,0.234321431833797,0,0,1.34503812496621,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.516628905878827,1.18800285728205,1.48360157567134,0,0,0,0.125118519871964,1.10825646193673,0.438977620880838,0.30648779579902,1.65261864797256,0,0.717558542755448,0.427114777637135,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0.558350568994769,0.843881661206331,0.292311015483596,0.757301322732344,0.460249493211497,0.161646056818812,0.710019185033229,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.821860859650752,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0,0.499864955910285,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.695068915744663,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,1.12264037773229,1.15325234330131,0,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0.581051892299796,0,0,0,0.68888668898764,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0.290012154876366,0.462145851343933,0.767518373630648,0.275673144969061,0.751941714077915,0.725083469571143,0.255679882248303,0.0890320356467374,0,0,0,0,0,1.25924938732256,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0.372158369359667,0.316379424718726,0.762520775695299,0,0.855877976067841,0.636406495851874,0,1.43897966066652,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,0.655894752046633,0.405820753925408,0,0.281695602532241,0,0,0,0.709522128141196,0.211107635297664,0.658589785919804,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0.461701551022782,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,1.3749625440701,0,0.199679000498991,0.429226048136571,0.446342914883745,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0.105600336519406,0,0,0,0.662091970365432,0,0,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,3.80812462358632,4.0110383043632,4.90152922821539,8.19681576774511,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.447764408660622,0,1.10961172300523,0.378806010550178,0.754703705257725,2.66943366478961,1.14420034198462,0.604923695052956,0.310874401165561,0.147855149989634,0.159296767163702,0,0.310525913752519,0.414706207840855,0.797525143673985,0.521745061811734,0.300515217994437,1.14241563650639,0.406870733204662,1.0910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| ||
|short_description=p9@LAMA4 | |||
}} | }} |
Latest revision as of 22:10, 19 September 2015
Short description: | p9@LAMA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LAMA4_5end |
Coexpression cluster: | C4546_mature_Adipocyte_Fibroblast_mesenchymal_vagina_Smooth_normal |
Association with transcript: | 238bp_to_ENST00000521398_5end |
EntrezGene: | LAMA4 |
HGNC: | 6484 |
UniProt: | E5RFQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.63e-39 | 15 |
subcutaneous fat cell | 5.13e-14 | 3 |
adipocyte of omentum tissue | 1.59e-12 | 3 |
multi fate stem cell | 4.69e-07 | 427 |
somatic stem cell | 7.78e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 5.13e-14 | 3 |
adipose tissue | 7.19e-14 | 14 |
omentum | 9.90e-11 | 6 |
peritoneum | 9.90e-11 | 6 |
abdominal cavity | 9.90e-11 | 6 |
visceral peritoneum | 9.90e-11 | 6 |
perirenal fat | 2.33e-09 | 2 |
hypodermis | 1.44e-08 | 5 |