FFCP PHASE1:Hg19::chr6:79787873..79787890,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55023 | |EntrezGene=55023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15673 | |HGNC=15673 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWQ0 | |UniProt=Q8WWQ0 | ||
|association_with_transcript=62bp_to_ENST00000275034_5end | |association_with_transcript=62bp_to_ENST00000275034_5end | ||
|cluster_id=chr6:79787873..79787890,- | |||
|coexpression_cluster_id=C132 | |coexpression_cluster_id=C132 | ||
|description=CAGE_peak_3_at_PHIP_5end | |description=CAGE_peak_3_at_PHIP_5end | ||
|id=chr6:79787873..79787890,- | |id=chr6:79787873..79787890,- | ||
|ontology_enrichment_celltype=CL:0000037!4.04e-18!172;CL:0000566!4.04e-18!172;CL:0000988!2.73e-17!182;CL:0002032!4.25e-16!165;CL:0000837!4.25e-16!165;CL:0000738!6.38e-15!140;CL:0000763!6.25e-14!112;CL:0000049!6.25e-14!112;CL:0002031!1.25e-12!124;CL:0000557!2.64e-11!71;CL:0000766!3.81e-11!76;CL:0002087!5.01e-11!119;CL:0000839!1.67e-10!70;CL:0002057!4.38e-10!42;CL:0000860!7.65e-10!45;CL:0002009!1.48e-09!65;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63 | |ontology_enrichment_celltype=CL:0000037!4.04e-18!172;CL:0000566!4.04e-18!172;CL:0000988!2.73e-17!182;CL:0002032!4.25e-16!165;CL:0000837!4.25e-16!165;CL:0000738!6.38e-15!140;CL:0000763!6.25e-14!112;CL:0000049!6.25e-14!112;CL:0002031!1.25e-12!124;CL:0000557!2.64e-11!71;CL:0000766!3.81e-11!76;CL:0002087!5.01e-11!119;CL:0000839!1.67e-10!70;CL:0002057!4.38e-10!42;CL:0000860!7.65e-10!45;CL:0002009!1.48e-09!65;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.12e-12;33!CL:0002057;7.12e-12;33!CL:0000576;1.75e-07;48!CL:0000473;1.89e-07;39!CL:0000234;1.89e-07;39!CL:0000540;4.02e-07;6!CL:0000404;4.02e-07;6!CL:0002319;9.62e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.06e-21,177;CL:0000037,7.44e-21,168;CL:0000738,8.77e-19,136;CL:0002032,3.54e-18,161;CL:0000837,3.54e-18,161;CL:0002031,2.85e-16,120;CL:0000763,2.35e-15,108;CL:0000049,2.35e-15,108;CL:0000557,5.82e-15,67;CL:0000766,4.29e-14,72;CL:0000839,1.21e-13,66;CL:0002087,2.07e-13,115;CL:0002009,3.45e-12,61;CL:0000860,4.67e-11,42;CL:0002057,4.67e-11,42;CL:0002194,8.61e-11,59;CL:0000576,8.61e-11,59;CL:0000040,8.61e-11,59;CL:0000559,8.61e-11,59;CL:0000047,1.53e-09,8;CL:0000473,1.02e-08,48;CL:0000234,1.02e-08,48;CL:0000540,4.45e-07,6;CL:0000031,4.45e-07,6;CL:0000404,4.45e-07,6;CL:0002319,9.49e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.04e-08;42!CL:0000031;4.02e-07;6 | |||
|ontology_enrichment_disease=DOID:2531!4.59e-07!51;DOID:0060083!4.59e-07!51 | |ontology_enrichment_disease=DOID:2531!4.59e-07!51;DOID:0060083!4.59e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.72e-12!32;UBERON:0001893!1.05e-11!34;UBERON:0002791!1.66e-11!33;UBERON:0002020!2.99e-11!34;UBERON:0003528!2.99e-11!34;UBERON:0000956!3.03e-10!25;UBERON:0000203!3.03e-10!25;UBERON:0002780!4.85e-10!41;UBERON:0001890!4.85e-10!41;UBERON:0006240!4.85e-10!41;UBERON:0001017!5.45e-10!82;UBERON:0002390!1.48e-09!102;UBERON:0003061!1.48e-09!102;UBERON:0003080!2.45e-09!42;UBERON:0002371!3.17e-09!80;UBERON:0001474!5.65e-09!86;UBERON:0005743!1.03e-08!86;UBERON:0002619!1.78e-08!22;UBERON:0000073!4.76e-08!94;UBERON:0001016!4.76e-08!94;UBERON:0001950!5.56e-08!20;UBERON:0002193!6.90e-08!112;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0002616!1.94e-07!59;UBERON:0000955!4.37e-07!69;UBERON:0006238!4.37e-07!69 | |ontology_enrichment_uberon=UBERON:0001869!4.72e-12!32;UBERON:0001893!1.05e-11!34;UBERON:0002791!1.66e-11!33;UBERON:0002020!2.99e-11!34;UBERON:0003528!2.99e-11!34;UBERON:0000956!3.03e-10!25;UBERON:0000203!3.03e-10!25;UBERON:0002780!4.85e-10!41;UBERON:0001890!4.85e-10!41;UBERON:0006240!4.85e-10!41;UBERON:0001017!5.45e-10!82;UBERON:0002390!1.48e-09!102;UBERON:0003061!1.48e-09!102;UBERON:0003080!2.45e-09!42;UBERON:0002371!3.17e-09!80;UBERON:0001474!5.65e-09!86;UBERON:0005743!1.03e-08!86;UBERON:0002619!1.78e-08!22;UBERON:0000073!4.76e-08!94;UBERON:0001016!4.76e-08!94;UBERON:0001950!5.56e-08!20;UBERON:0002193!6.90e-08!112;UBERON:0001049!1.57e-07!57;UBERON:0005068!1.57e-07!57;UBERON:0006241!1.57e-07!57;UBERON:0007135!1.57e-07!57;UBERON:0002616!1.94e-07!59;UBERON:0000955!4.37e-07!69;UBERON:0006238!4.37e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.79e-11;32!UBERON:0000956;1.97e-11;25!UBERON:0000203;1.97e-11;25!UBERON:0002791;5.15e-11;32!UBERON:0003528;5.34e-10;34!UBERON:0002020;5.34e-10;34!UBERON:0001893;1.23e-09;34!UBERON:0002619;1.27e-08;22!UBERON:0001950;2.51e-08;20!UBERON:0002780;6.81e-07;41!UBERON:0001890;6.81e-07;41 | |||
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| ||
|short_description=p3@PHIP | |short_description=p3@PHIP | ||
}} | }} |
Latest revision as of 22:09, 19 September 2015
Short description: | p3@PHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHIP_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 62bp_to_ENST00000275034_5end |
EntrezGene: | PHIP |
HGNC: | 15673 |
UniProt: | Q8WWQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.06e-21 | 177 |
hematopoietic stem cell | 7.44e-21 | 168 |
leukocyte | 8.77e-19 | 136 |
hematopoietic oligopotent progenitor cell | 3.54e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 2.85e-16 | 120 |
myeloid cell | 2.35e-15 | 108 |
common myeloid progenitor | 2.35e-15 | 108 |
granulocyte monocyte progenitor cell | 5.82e-15 | 67 |
myeloid leukocyte | 4.29e-14 | 72 |
myeloid lineage restricted progenitor cell | 1.21e-13 | 66 |
nongranular leukocyte | 2.07e-13 | 115 |
macrophage dendritic cell progenitor | 3.45e-12 | 61 |
classical monocyte | 4.67e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-11 | 42 |
monopoietic cell | 8.61e-11 | 59 |
monocyte | 8.61e-11 | 59 |
monoblast | 8.61e-11 | 59 |
promonocyte | 8.61e-11 | 59 |
neuronal stem cell | 1.53e-09 | 8 |
defensive cell | 1.02e-08 | 48 |
phagocyte | 1.02e-08 | 48 |
neuron | 4.45e-07 | 6 |
neuroblast | 4.45e-07 | 6 |
electrically signaling cell | 4.45e-07 | 6 |
neural cell | 9.49e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-13 | 76 |
bone element | 2.03e-12 | 82 |
hematopoietic system | 2.70e-12 | 98 |
blood island | 2.70e-12 | 98 |
regional part of telencephalon | 6.57e-12 | 32 |
cerebral hemisphere | 6.57e-12 | 32 |
cerebral cortex | 2.33e-11 | 25 |
pallium | 2.33e-11 | 25 |
brain grey matter | 7.97e-11 | 34 |
gray matter | 7.97e-11 | 34 |
telencephalon | 7.97e-11 | 34 |
hemolymphoid system | 1.46e-10 | 108 |
skeletal element | 3.05e-10 | 90 |
immune system | 1.59e-09 | 93 |
skeletal system | 1.04e-08 | 100 |
regional part of cerebral cortex | 1.42e-08 | 22 |
neocortex | 2.92e-08 | 20 |
regional part of forebrain | 6.57e-08 | 41 |
forebrain | 6.57e-08 | 41 |
anterior neural tube | 6.57e-08 | 41 |
future forebrain | 6.57e-08 | 41 |
central nervous system | 7.89e-07 | 81 |