FFCP PHASE1:Hg19::chr17:37793378..37793432,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17579 | |||
|TSSclassifier=strong | |||
|UniProt=A8MXA4 | |||
|association_with_transcript=0bp_to_ENST00000394250,uc002hsd.2,uc002hse.2,uc010weg.1,uc010weh.1,uc010wei.1_5end | |||
|cluster_id=chr17:37793378..37793432,+ | |||
|description=CAGE_peak_1_at_STARD3_5end | |||
|id=chr17:37793378..37793432,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.87e-18!76;CL:0002194!1.50e-15!63;CL:0000576!1.50e-15!63;CL:0000040!1.50e-15!63;CL:0000559!1.50e-15!63;CL:0000557!2.22e-15!71;CL:0002009!1.28e-14!65;CL:0002057!1.51e-14!42;CL:0000839!5.29e-14!70;CL:0000860!1.96e-11!45;CL:0002087!1.72e-09!119;CL:0000738!5.57e-09!140;CL:0002031!3.05e-08!124;CL:0000763!2.59e-07!112;CL:0000049!2.59e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.12e-13;39!CL:0000234;1.12e-13;39!CL:0000860;4.08e-13;33!CL:0002057;4.08e-13;33!CL:0000576;6.57e-10;48!CL:0000766;6.13e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.55e-20,72;CL:0002194,2.03e-18,59;CL:0000576,2.03e-18,59;CL:0000040,2.03e-18,59;CL:0000559,2.03e-18,59;CL:0000557,5.38e-18,67;CL:0000473,1.71e-17,48;CL:0000234,1.71e-17,48;CL:0002009,2.64e-17,61;CL:0000839,1.78e-16,66;CL:0000860,1.51e-14,42;CL:0002057,1.51e-14,42;CL:0002087,7.67e-11,115;CL:0000738,3.65e-10,136;CL:0002031,1.93e-09,120;CL:0000763,1.74e-08,108;CL:0000049,1.74e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.52e-18!102;UBERON:0003061!8.52e-18!102;UBERON:0002193!4.20e-17!112;UBERON:0002371!9.20e-15!80;UBERON:0003081!9.78e-15!216;UBERON:0001474!8.19e-13!86;UBERON:0002405!7.69e-12!115;UBERON:0004765!2.60e-09!101;UBERON:0001434!2.60e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.66e-20,98;UBERON:0003061,4.66e-20,98;UBERON:0002193,3.55e-19,108;UBERON:0002371,4.18e-17,76;UBERON:0002405,1.64e-16,93;UBERON:0001474,7.72e-15,82;UBERON:0003081,7.63e-14,203;UBERON:0004765,6.97e-13,90;UBERON:0001434,6.41e-11,100;UBERON:0002204,8.08e-08,167;UBERON:0000926,7.04e-07,315;UBERON:0004120,7.04e-07,315;UBERON:0006603,7.04e-07,315 | |||
|phase1_expression=55.4119056775198,48.3867183993622,47.2197253721503,55.0403140942217,54.5292535201291,56.702004066524,60.7919707603945,65.6988668363904,55.3713531783658,56.2730714588455,183.521707176748,81.0417490602939,84.1416660548767,49.2590084780986,54.3491696193782,43.7011345193654,42.7913114897024,52.5823265078909,51.2329438730032,59.5905921091653,76.0922578341064,72.7214953829164,33.2033745072026,36.1348482192414,42.1823269038537,32.6285242543752,29.0636086652808,29.9888076805118,40.5165205154371,30.706351847777,69.8220716155503,68.0371706114406,70.4821849941105,55.4631015250182,30.5220770286388,22.1784002680378,29.6536443728196,62.0474857555703,81.6215901203477,93.0976635371004,97.627146768607,106.237122454225,102.515075918406,70.808942285648,78.9760722309612,84.1766692321722,90.4148953563113,85.9340885965616,82.0721882872025,89.7600264045109,88.3754437525397,69.5257755872441,72.7413386354265,79.3946160808106,67.7132432971709,87.156203208226,73.6846605156184,65.1698104890745,72.235798599533,74.4555342816537,77.359792221684,103.573308258629,89.1602549568694,98.8841421235851,78.6467036683463,72.0579235357747,77.2299588754513,88.4395301703736,94.9098911524766,78.187984093842,76.2803373318045,58.1878664860352,62.0266279384133,50.912524001178,53.576283591191,56.1885169962447,52.1204848519737,53.9135045301008,55.4503274104926,36.4816311988798,48.1378358821798,50.7806347465682,61.5986855614629,38.7758413996113,41.8069349315871,37.5522595858526,40.8403906776733,32.7608890774055,45.6120962221555,37.2080964268792,67.1671303549149,66.3578023989161,66.8978149219151,40.973111859498,47.082719290449,35.5568514446354,64.3240948272234,81.7462386518263,76.8949606258164,49.1528296448594,50.5179513282065,35.0351376243703,81.8272259313228,52.4743251929168,57.1535460501184,61.3648887996631,55.2439882080632,60.331011590793,60.2174779202236,60.5131488941528,75.9962548911083,60.858648004361,79.1850247285403,74.3763502089402,99.3087476147279,49.5161827588364,55.5669715722786,56.6985285046339,53.6401747081346,48.7405083915868,55.3420935777956,35.1667256445898,40.6552821509987,41.0837021805683,57.4681342140791,41.1992418556589,53.373319799868,55.4418543868014,64.9879675753923,63.8675621123144,34.1329612839546,71.0942911285854,22.2480857607743,42.6498199813788,52.6404806167684,41.5709509417564,49.3077287171682,72.9952305453954,43.2969462611431,43.0155031077374,45.322749417653,43.288584451994,80.8735540009444,45.2357020197004,94.1187441598582,111.61716160883,90.5443711133472,44.3592561207936,33.7476997360275,36.0313776289678,29.8143611050058,38.7105567797756,65.9566953054429,52.0083306570089,49.9204329089788,42.3681784587704,32.6032147797425,32.5605116553354,41.6246527343451,35.480384953055,53.1734698584074,47.8971426602663,61.5036385021387,27.2070679455943,39.6969554462062,28.9331119640418,48.4983444872527,50.675166217495,58.2603222370356,58.854470893224,43.9684185432977,135.733829959145,131.845289810431,59.7448851435272,40.7517000390161,26.7190379612263,44.754303114868,69.1276256004641,42.2055374816045,33.6406560085384,46.9695581210702,56.2402010391125,31.4323145753764,30.3099012156798,34.3269996538263,47.3748748528635,63.3793516927999,78.0290368006543,40.892970064772,46.2082175451004,38.2588622212611,31.5898801351728,32.6983347623626,36.7981113559891,37.3602133396455,42.0093365206246,41.5369640326577,32.0760771466154,44.7553141994188,67.351940783414,142.286392079615,30.3005005117319,32.7810522064546,35.1871426664912,46.5316278133688,32.7941941504951,52.2828444994957,27.7908848742052,56.5077352419915,43.7792647078063,34.9687636913277,85.8260534801391,27.2058677189479,54.6197944896734,37.5956049789811,59.9155979456495,32.8362707393239,49.2245859776023,38.6609574297657,37.9868233524208,79.5221487237216,28.009083307284,37.6424514929283,42.7106485490886,32.7295344709002,33.2693330651244,29.6396105894917,32.0722039337994,33.8124373750299,39.2875398508254,39.8666944383493,38.687600062038,59.4508222853301,55.3187206845881,58.0166669680418,52.0092079395817,72.1879481669586,33.8357448113954,39.6174021683539,34.7055883032214,35.7352471652956,41.832853265742,39.1496521533309,36.1347905869241,40.2254003506959,41.9374401071566,59.7905918245965,81.3402288059986,52.2698994390878,85.2650526036143,34.2238594018943,62.9009418673681,45.4908228144681,39.2902158479039,26.3195258482263,33.627290818511,37.6443478951586,64.0689993568432,31.6666263096637,23.9804072960592,57.9938783452378,85.2746523929254,28.8662684050547,50.3137957591833,51.7772341579974,41.7219034029503,48.6134788205441,37.8605762946851,26.0767451326561,33.4809603217,99.2254534532211,54.5229937774424,92.7458452681664,25.3081351764298,23.3495158196415,19.1396381277222,24.7181522659861,27.0289562817985,54.44034044146,15.2725603747742,47.0178637630627,77.333387096708,85.895492236509,74.9880054552697,57.4020964401208,104.28284017741,123.078319570549,90.6683963920338,46.0667167310889,66.3758157835058,75.1723517818421,60.7750477151855,56.2388488794931,42.9762354910767,40.8498621794578,36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| |||
|short_description=p1@STARD3 | |||
}} |
Latest revision as of 22:00, 19 September 2015
Short description: | p1@STARD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STARD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394250, uc002hsd.2, uc002hse.2, uc010weg.1, uc010weh.1, uc010wei.1_5end |
EntrezGene: | STARD3 |
HGNC: | 17579 |
UniProt: | A8MXA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.55e-20 | 72 |
monopoietic cell | 2.03e-18 | 59 |
monocyte | 2.03e-18 | 59 |
monoblast | 2.03e-18 | 59 |
promonocyte | 2.03e-18 | 59 |
granulocyte monocyte progenitor cell | 5.38e-18 | 67 |
defensive cell | 1.71e-17 | 48 |
phagocyte | 1.71e-17 | 48 |
macrophage dendritic cell progenitor | 2.64e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.78e-16 | 66 |
classical monocyte | 1.51e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-14 | 42 |
nongranular leukocyte | 7.67e-11 | 115 |
leukocyte | 3.65e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.93e-09 | 120 |
myeloid cell | 1.74e-08 | 108 |
common myeloid progenitor | 1.74e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.66e-20 | 98 |
blood island | 4.66e-20 | 98 |
hemolymphoid system | 3.55e-19 | 108 |
bone marrow | 4.18e-17 | 76 |
immune system | 1.64e-16 | 93 |
bone element | 7.72e-15 | 82 |
lateral plate mesoderm | 7.63e-14 | 203 |
skeletal element | 6.97e-13 | 90 |
skeletal system | 6.41e-11 | 100 |
musculoskeletal system | 8.08e-08 | 167 |
mesoderm | 7.04e-07 | 315 |
mesoderm-derived structure | 7.04e-07 | 315 |
presumptive mesoderm | 7.04e-07 | 315 |