FFCP PHASE1:Hg19::chr17:37785414..37785430,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:37785414..37785430,+ to FFCP PHASE1:Hg19::chr17:37785414..37785430,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84152 | |EntrezGene=84152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9287 | |HGNC=9287 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-227bp_to_ENST00000492037_5end | |||
|cluster_id=chr17:37785414..37785430,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_8_at_PPP1R1B_5end | |||
|id=chr17:37785414..37785430,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.31e-09;1!UBERON:0005754;3.87e-09;1!UBERON:0006298;4.18e-09;1!UBERON:0006222;1.17e-08;1!UBERON:0005425;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.17e-08;1!DOID:1357;1.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.36e-09,1;DOID:1357,8.36e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.74e-55!115;UBERON:0001049!1.23e-30!57;UBERON:0005068!1.23e-30!57;UBERON:0006241!1.23e-30!57;UBERON:0007135!1.23e-30!57;UBERON:0001017!6.60e-28!82;UBERON:0005743!1.73e-27!86;UBERON:0002616!2.31e-27!59;UBERON:0000073!2.69e-25!94;UBERON:0001016!2.69e-25!94;UBERON:0000955!8.61e-25!69;UBERON:0006238!8.61e-25!69;UBERON:0002780!4.21e-24!41;UBERON:0001890!4.21e-24!41;UBERON:0006240!4.21e-24!41;UBERON:0003080!2.37e-23!42;UBERON:0003075!2.37e-19!86;UBERON:0007284!2.37e-19!86;UBERON:0001893!7.51e-19!34;UBERON:0001869!2.85e-18!32;UBERON:0002346!5.06e-18!90;UBERON:0002791!8.83e-18!33;UBERON:0000033!3.29e-17!123;UBERON:0000153!6.93e-17!129;UBERON:0007811!6.93e-17!129;UBERON:0002020!3.07e-15!34;UBERON:0003528!3.07e-15!34;UBERON:0003056!5.29e-15!61;UBERON:0004121!1.06e-13!169;UBERON:0000924!4.38e-13!173;UBERON:0006601!4.38e-13!173;UBERON:0002619!2.15e-11!22;UBERON:0001950!5.08e-11!20;UBERON:0002420!4.03e-10!9;UBERON:0007245!4.03e-10!9;UBERON:0010009!4.03e-10!9;UBERON:0010011!4.03e-10!9;UBERON:0000454!4.03e-10!9;UBERON:0003135!6.72e-10!11;UBERON:0009663!7.45e-10!7;UBERON:0000956!1.09e-09!25;UBERON:0000203!1.09e-09!25;UBERON:0000369!1.42e-08!4;UBERON:0002435!1.42e-08!4;UBERON:0000204!1.42e-08!4;UBERON:0010082!1.42e-08!4;UBERON:0003076!2.18e-08!15;UBERON:0003057!2.18e-08!15;UBERON:0000062!2.79e-08!511;UBERON:0004111!3.98e-08!241;UBERON:0000473!4.67e-08!8;UBERON:0002308!1.87e-07!9;UBERON:0000125!1.87e-07!9;UBERON:0005383!7.28e-07!3;UBERON:0005382!7.28e-07!3;UBERON:0001894!7.78e-07!7;UBERON:0006222!7.78e-07!7;UBERON:0001896!8.02e-07!3;UBERON:0005290!8.02e-07!3;UBERON:0010096!8.02e-07!3;UBERON:0006947!8.34e-07!3;UBERON:0004054!8.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.37e-16;2!UBERON:0003127;1.33e-15;2!UBERON:0001044;2.57e-12;6!UBERON:0003293;2.57e-12;6!UBERON:0003294;2.57e-12;6!UBERON:0010047;2.57e-12;6!UBERON:0003408;2.57e-12;6!UBERON:0000167;2.57e-12;6!UBERON:0006947;2.67e-11;3!UBERON:0004054;2.67e-11;3!UBERON:0001831;3.31e-09;1!UBERON:0001567;3.31e-09;1!UBERON:0000998;3.87e-09;1!UBERON:0006868;3.87e-09;1!UBERON:0001736;4.18e-09;1!UBERON:0001000;4.52e-09;1!UBERON:0005352;4.52e-09;1!UBERON:0002171;5.27e-09;1!UBERON:0006518;5.27e-09;1!UBERON:0008949;5.27e-09;1!UBERON:0000101;5.27e-09;1!UBERON:0002167;5.27e-09;1!UBERON:0001041;5.64e-09;14!UBERON:0004921;6.99e-09;33!UBERON:0005904;1.09e-08;4!UBERON:0000941;1.17e-08;1!UBERON:0001764;1.17e-08;1!UBERON:0001785;1.17e-08;1!UBERON:0002464;1.17e-08;1!UBERON:0004904;1.17e-08;1!UBERON:0001825;1.17e-08;1!UBERON:0001021;1.17e-08;1!UBERON:0001155;7.27e-08;9!UBERON:0007023;4.01e-07;114!UBERON:0003135;9.60e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.37e-16,2;UBERON:0003127,7.88e-16,2;UBERON:0001044,2.58e-12,6;UBERON:0003293,2.58e-12,6;UBERON:0003294,2.58e-12,6;UBERON:0010047,2.58e-12,6;UBERON:0000167,2.58e-12,6;UBERON:0007023,5.82e-12,114;UBERON:0006947,2.67e-11,3;UBERON:0004054,2.67e-11,3;UBERON:0001831,3.31e-09,1;UBERON:0001567,3.31e-09,1;UBERON:0008801,3.31e-09,1;UBERON:0000998,3.87e-09,1;UBERON:0006868,3.87e-09,1;UBERON:0001736,4.19e-09,1;UBERON:0006298,4.19e-09,1;UBERON:0001000,4.52e-09,1;UBERON:0005352,4.52e-09,1;UBERON:0002171,5.70e-09,1;UBERON:0006518,5.70e-09,1;UBERON:0008949,5.70e-09,1;UBERON:0000101,5.70e-09,1;UBERON:0002167,5.70e-09,1;UBERON:0001764,8.36e-09,1;UBERON:0001825,8.36e-09,1;UBERON:0000941,9.02e-09,1;UBERON:0001785,9.02e-09,1;UBERON:0002464,9.02e-09,1;UBERON:0004904,9.02e-09,1;UBERON:0001021,9.02e-09,1;UBERON:0003902,9.02e-09,1;UBERON:0005425,9.02e-09,1;UBERON:0005904,1.09e-08,4;UBERON:0001155,6.54e-08,9;UBERON:0003408,1.43e-07,10 | |||
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| ||
|short_description=p8@PPP1R1B | |||
}} | }} |
Latest revision as of 22:00, 19 September 2015
Short description: | p8@PPP1R1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPP1R1B_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -227bp_to_ENST00000492037_5end |
EntrezGene: | PPP1R1B |
HGNC: | 9287 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.37e-16 | 2 |
open tracheal system trachea | 7.88e-16 | 2 |
saliva-secreting gland | 2.58e-12 | 6 |
gland of oral region | 2.58e-12 | 6 |
gland of foregut | 2.58e-12 | 6 |
oral gland | 2.58e-12 | 6 |
oral cavity | 2.58e-12 | 6 |
adult organism | 5.82e-12 | 114 |
male genital duct | 2.67e-11 | 3 |
internal male genitalia | 2.67e-11 | 3 |
parotid gland | 3.31e-09 | 1 |
cheek | 3.31e-09 | 1 |
parotid gland primordium | 3.31e-09 | 1 |
seminal vesicle | 3.87e-09 | 1 |
seminal fluid secreting gland | 3.87e-09 | 1 |
submandibular gland | 4.19e-09 | 1 |
submandibular gland primordium | 4.19e-09 | 1 |
vas deferens | 4.52e-09 | 1 |
spermatic cord | 4.52e-09 | 1 |
lower lobe of right lung | 5.70e-09 | 1 |
right lung lobe | 5.70e-09 | 1 |
lower lobe of lung | 5.70e-09 | 1 |
lobe of lung | 5.70e-09 | 1 |
right lung | 5.70e-09 | 1 |
maxillary sinus | 8.36e-09 | 1 |
paranasal sinus | 8.36e-09 | 1 |
cranial nerve II | 9.02e-09 | 1 |
cranial nerve | 9.02e-09 | 1 |
nerve trunk | 9.02e-09 | 1 |
nerve connecting eye with brain | 9.02e-09 | 1 |
nerve | 9.02e-09 | 1 |
retinal neural layer | 9.02e-09 | 1 |
presumptive neural retina | 9.02e-09 | 1 |
duct of male reproductive system | 1.09e-08 | 4 |
colon | 6.54e-08 | 9 |
gland of gut | 1.43e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.36e-09 | 1 |
maxillary sinus cancer | 8.36e-09 | 1 |