FFCP PHASE1:Hg19::chr1:203144944..203144961,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4608 | |EntrezGene=4608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7552 | |HGNC=7552 | ||
|TSSclassifier=strong | |||
|UniProt=Q13203 | |UniProt=Q13203 | ||
|association_with_transcript=-2bp_to_NM_004997,uc001gzh.1_5end | |association_with_transcript=-2bp_to_NM_004997,uc001gzh.1_5end | ||
|cluster_id=chr1:203144944..203144961,- | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_1_at_MYBPH_5end | |description=CAGE_peak_1_at_MYBPH_5end | ||
|id=chr1:203144944..203144961,- | |id=chr1:203144944..203144961,- | ||
|ontology_enrichment_celltype=CL:0000188!1.68e-08!9 | |ontology_enrichment_celltype=CL:0000188!1.68e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.49e-14;9!CL:0000680;1.17e-10;7!CL:0000515;3.55e-07;3!CL:0000594;4.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.48e-14,9;CL:0000594,4.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.97e-07!365 | |ontology_enrichment_uberon=UBERON:0000475!5.97e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.26e-27;16!UBERON:0002036;1.26e-27;16!UBERON:0002385;1.47e-13;31!UBERON:0001015;1.47e-13;31!UBERON:0000383;1.47e-13;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.68e-09,62;UBERON:0002036,5.68e-09,62;UBERON:0003082,5.68e-09,62;UBERON:0002329,7.97e-09,71;UBERON:0003059,7.97e-09,71;UBERON:0007282,7.97e-09,71;UBERON:0004290,7.97e-09,71;UBERON:0009618,7.97e-09,71;UBERON:0003077,1.29e-08,72;UBERON:0007285,1.29e-08,72;UBERON:0002385,1.63e-08,64;UBERON:0001015,1.63e-08,64;UBERON:0000383,1.63e-08,64;UBERON:0007524,2.04e-08,73;UBERON:0000486,3.24e-08,83;UBERON:0005256,1.16e-07,122;UBERON:0007503,1.70e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0,0,0.16072558669708,1.99508920618874,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,3.9764297352555,1.45990461090791,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,1.24484414159907,0,0,0,0,0,1.24864030732128,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,4.00379263590285,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0.515281080091258,1.11670113798954,1.0126579934476,0.292311015483596,0.504867548488229,0.368199594569197,2.10139873864455,0.710019185033229,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,4.14404764057442,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,157.29932118253,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7296933755565,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5320553337212,36.3693090914179,15.7573647651108,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00170521059677,0.542530047399471,0,0,0,0.234282829985426,0,0,0,0,0,0.695068915744663,5.286631251494,1349.92622927191,0.206768026122887,0,0,0,0,0,0,0,0,1.02511319404561,1.02341449813341,0,0,0.154209693802656,2.13074070375753,4.84550220481474,0,1.27831416305955,0.604297247958111,0,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,27.9378375864232,35.7392791705975,79.2078961586828,171.88220588821,4.83391101907231,77.438914550198,172.924827027269,918.632543803036,0,0,0,0,0,0,0,0,0,0,0,0,9.30395923399168,1.58189712359363,0,0,0.42793898803392,0.95460974377781,0,3.41757669408298,0,0,0,0,0,8.28977356452303,0,0,0,0.282810863907425,0,0,0,0,2.31510213706675,0.655894752046633,0,4.3375289733965,0,0,0.196498082026242,0,0.354761064070598,3.16661452946496,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,2.16403819464667,0,0,0,0,0,0,0,11.1834992726264,0.156679895773023,0,0,1.76646882614069,0.80719882876419,1.70338495076131,1.37402137902306,31.3385579594627,32.4330356444003,36.539962034908,1.17232857241224,0,0,0,0,0,0,1.46508179271894,0,0,79.2739849589893,0,0,0,0,1.82870241333667,0,0,0,0,0,0,0,1.10776324914963,0,0,0,102.826046415601,0.591860433821602,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.482385754501632,0,0.774054819518572,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,45.9397482160308,0,0,0,0,0,0,0,0.067401132980677,106.742827090739,0.234264445725339,0.364909578431332,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0.171986032471617,0,0,0,5.91633000579358,0,9.26521037200183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.941425616810999,0,2.88950589901519,0,1.36905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0,2.54019996197353,0,1.22583065500418,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.891727998294968,2.42880773994635,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0.851940108927109,0,0,2.65013777824443,0.258565912723101,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,1.88579387612649,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,6.10286447652875,6.25029917407794,22.8926790594843,17.7962244319307,0,4.83938956042365,0,0.147855149989634,0,0,0,0,1.32920857278997,0,0,0,0,0.727394636810238,0,0.464033759878494,0,434.430152424185,1.03018711554838,1.01024846629776,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.337884881306145,0,0,0,0.829550616910385,0,0.132864840313363,0,0,0,0,0,4.58774437684806,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.957803154342908,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,1.03343398250592,0.0634158101939068,0,0,4.96211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,10.8037445945574,0.0679697329768317,0.0657727735628491,1.18193840883968,0,0.235479278551542,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,2.95559062914385,2.40513409419076,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,24.60229581314,79.0503612793102,194.848824464817,5.82853191670967,0,0,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0.196308467114945,1.18818560130834,0.4226557275834,0,0.469919589899268,2.77168918286382,0,0,0,0,0,4.12856355064087,1.86341458096887,0,0.0679914901909147,0,0,11.5318455631693,1.38652688589425,9.95041092884715,0,0,0,0,0,0,0,0.682008283964155,0,0,3.30985586758065,10.0219971493461,41.8993399376183,1.29177819672012,2.04846557176331,0.33639558774184,5.53730277020035,1.21270313374932,18.7236403191387,42.0946960334896,2.89613827962726,3.87299909120452,12.9737539052945,0,0.106727345877715,0,0,7.03922827210363,0.122241444182866,0,1.33151354837103,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0.422510572623884,0,0.209658645508376,0,0,0.16072558669708,1.99508920618874,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,3.9764297352555,1.45990461090791,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,1.24484414159907,0,0,0,0,0,1.24864030732128,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.168336113954066,4.00379263590285,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,0.515281080091258,1.11670113798954,1.0126579934476,0.292311015483596,0.504867548488229,0.368199594569197,2.10139873864455,0.710019185033229,0,0,0,0,0,0,0,0.464775771478074,0.10366105501537,0,0,0,0,4.14404764057442,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,157.29932118253,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10603838625314,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7296933755565,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5320553337212,36.3693090914179,15.7573647651108,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00170521059677,0.542530047399471,0,0,0,0.234282829985426,0,0,0,0,0,0.695068915744663,5.286631251494,1349.92622927191,0.206768026122887,0,0,0,0,0,0,0,0,1.02511319404561,1.02341449813341,0,0,0.154209693802656,2.13074070375753,4.84550220481474,0,1.27831416305955,0.604297247958111,0,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,27.9378375864232,35.7392791705975,79.2078961586828,171.88220588821,4.83391101907231,77.438914550198,172.924827027269,918.632543803036,0,0,0,0,0,0,0,0,0,0,0,0,9.30395923399168,1.58189712359363,0,0,0.42793898803392,0.95460974377781,0,3.41757669408298,0,0,0,0,0,8.28977356452303,0,0,0,0.282810863907425,0,0,0,0,2.31510213706675,0.655894752046633,0,4.3375289733965,0,0,0.196498082026242,0,0.354761064070598,3.16661452946496,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11481905075431,2.16403819464667,0,0,0,0,0,0,0,11.1834992726264,0.156679895773023,0,0,1.76646882614069,0.80719882876419,1.70338495076131,1.37402137902306,31.3385579594627,32.4330356444003,36.539962034908,1.17232857241224,0,0,0,0,0,0,1.46508179271894,0,0,79.2739849589893,0,0,0,0,1.82870241333667,0,0,0,0,0,0,0,1.10776324914963,0,0,0,102.826046415601,0.591860433821602,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.482385754501632,0,0.774054819518572,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,45.9397482160308,0,0,0,0,0,0,0,0.067401132980677,106.742827090739,0.234264445725339,0.364909578431332,0,0.728341138602278,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0.171986032471617,0,0,0,5.91633000579358,0,9.26521037200183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.941425616810999,0,2.88950589901519,0,1.36905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0,2.54019996197353,0,1.22583065500418,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,0.891727998294968,2.42880773994635,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0.851940108927109,0,0,2.65013777824443,0.258565912723101,1.58679122091228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0,1.88579387612649,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,6.10286447652875,6.25029917407794,22.8926790594843,17.7962244319307,0,4.83938956042365,0,0.147855149989634,0,0,0,0,1.32920857278997,0,0,0,0,0.727394636810238,0,0.464033759878494,0,434.430152424185,1.03018711554838,1.01024846629776,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.337884881306145,0,0,0,0.829550616910385,0,0.132864840313363,0,0,0,0,0,4.58774437684806,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.957803154342908,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,1.03343398250592,0.0634158101939068,0,0,4.96211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,10.8037445945574,0.0679697329768317,0.0657727735628491,1.18193840883968,0,0.235479278551542,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,2.95559062914385,2.40513409419076,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,24.60229581314,79.0503612793102,194.848824464817,5.82853191670967,0,0,0,0.45178432815584,0,0.150962843566674,0,0,0,0,0,0.196308467114945,1.18818560130834,0.4226557275834,0,0.469919589899268,2.77168918286382,0,0,0,0,0,4.12856355064087,1.86341458096887,0,0.0679914901909147,0,0,11.5318455631693,1.38652688589425,9.95041092884715,0,0,0,0,0,0,0,0.682008283964155,0,0,3.30985586758065,10.0219971493461,41.8993399376183,1.29177819672012,2.04846557176331,0.33639558774184,5.53730277020035,1.21270313374932,18.7236403191387,42.0946960334896,2.89613827962726,3.87299909120452,12.9737539052945,0,0.106727345877715,0,0,7.03922827210363,0.122241444182866,0,1.33151354837103,0.402547587182052,0 | ||
|short_description=p1@MYBPH | |short_description=p1@MYBPH | ||
}} | }} |
Latest revision as of 21:55, 19 September 2015
Short description: | p1@MYBPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYBPH_5end |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | -2bp_to_NM_004997, uc001gzh.1_5end |
EntrezGene: | MYBPH |
HGNC: | 7552 |
UniProt: | Q13203 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.48e-14 | 9 |
skeletal muscle satellite cell | 4.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.68e-09 | 62 |
striated muscle tissue | 5.68e-09 | 62 |
myotome | 5.68e-09 | 62 |
somite | 7.97e-09 | 71 |
presomitic mesoderm | 7.97e-09 | 71 |
presumptive segmental plate | 7.97e-09 | 71 |
dermomyotome | 7.97e-09 | 71 |
trunk paraxial mesoderm | 7.97e-09 | 71 |
paraxial mesoderm | 1.29e-08 | 72 |
presumptive paraxial mesoderm | 1.29e-08 | 72 |
muscle tissue | 1.63e-08 | 64 |
musculature | 1.63e-08 | 64 |
musculature of body | 1.63e-08 | 64 |
dense mesenchyme tissue | 2.04e-08 | 73 |
multilaminar epithelium | 3.24e-08 | 83 |
trunk mesenchyme | 1.16e-07 | 122 |
epithelial vesicle | 1.70e-07 | 78 |