FFCP PHASE1:Hg19::chr3:98240542..98240558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56650 | |EntrezGene=56650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1322 | |HGNC=1322 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY35 | |UniProt=Q9NY35 | ||
|association_with_transcript=-261bp_to_uc003dso.2_5end | |association_with_transcript=-261bp_to_uc003dso.2_5end | ||
|cluster_id=chr3:98240542..98240558,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_5_at_CLDND1_5end | |description=CAGE_peak_5_at_CLDND1_5end |
Latest revision as of 21:47, 19 September 2015
Short description: | p5@CLDND1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLDND1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -261bp_to_uc003dso.2_5end |
EntrezGene: | CLDND1 |
HGNC: | 1322 |
UniProt: | Q9NY35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@CLDND1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.33e-74 | 56 |
neural rod | 1.33e-74 | 56 |
future spinal cord | 1.33e-74 | 56 |
neural keel | 1.33e-74 | 56 |
regional part of nervous system | 1.25e-68 | 53 |
regional part of brain | 1.25e-68 | 53 |
brain | 2.95e-55 | 68 |
future brain | 2.95e-55 | 68 |
central nervous system | 1.73e-52 | 81 |
neural plate | 1.76e-52 | 82 |
Showing 1 to 10 of 77 entries