FFCP PHASE1:Hg19::chr19:54726874..54726887,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11025 | |EntrezGene=11025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6607 | |HGNC=6607 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6G6 | |UniProt=F8W6G6 | ||
|association_with_transcript=23bp_to_ENST00000346401_5end | |association_with_transcript=23bp_to_ENST00000346401_5end | ||
|cluster_id=chr19:54726874..54726887,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_LILRB3_5end | |description=CAGE_peak_1_at_LILRB3_5end | ||
|id=chr19:54726874..54726887,- | |id=chr19:54726874..54726887,- | ||
|ontology_enrichment_celltype=CL:0000766!4.81e-76!76;CL:0002194!7.77e-70!63;CL:0000576!7.77e-70!63;CL:0000040!7.77e-70!63;CL:0000559!7.77e-70!63;CL:0002009!1.19e-69!65;CL:0002057!3.90e-68!42;CL:0000557!1.75e-64!71;CL:0000839!2.57e-63!70;CL:0000860!1.40e-62!45;CL:0000763!7.76e-47!112;CL:0000049!7.76e-47!112;CL:0000738!2.18e-46!140;CL:0002087!1.05e-38!119;CL:0002031!1.46e-34!124;CL:0000037!1.11e-33!172;CL:0000566!1.11e-33!172;CL:0000988!1.20e-30!182;CL:0002032!7.43e-30!165;CL:0000837!7.43e-30!165;CL:0002393!3.16e-14!9;CL:0002397!3.16e-14!9;CL:0000094!5.15e-11!8;CL:0000081!1.32e-07!11 | |ontology_enrichment_celltype=CL:0000766!4.81e-76!76;CL:0002194!7.77e-70!63;CL:0000576!7.77e-70!63;CL:0000040!7.77e-70!63;CL:0000559!7.77e-70!63;CL:0002009!1.19e-69!65;CL:0002057!3.90e-68!42;CL:0000557!1.75e-64!71;CL:0000839!2.57e-63!70;CL:0000860!1.40e-62!45;CL:0000763!7.76e-47!112;CL:0000049!7.76e-47!112;CL:0000738!2.18e-46!140;CL:0002087!1.05e-38!119;CL:0002031!1.46e-34!124;CL:0000037!1.11e-33!172;CL:0000566!1.11e-33!172;CL:0000988!1.20e-30!182;CL:0002032!7.43e-30!165;CL:0000837!7.43e-30!165;CL:0002393!3.16e-14!9;CL:0002397!3.16e-14!9;CL:0000094!5.15e-11!8;CL:0000081!1.32e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-78;33!CL:0002057;2.05e-78;33!CL:0000473;3.90e-77;39!CL:0000234;3.90e-77;39!CL:0000576;5.82e-64;48!CL:0000766;4.46e-50;69!CL:0000763;4.16e-24;100!CL:0000094;8.41e-17;8!CL:0002087;1.11e-16;104!CL:0000235;2.55e-15;6!CL:0000738;1.19e-14;136!CL:0000081;6.72e-12;11!CL:0002393;7.12e-11;6!CL:0002397;7.12e-11;6!CL:0000775;1.13e-09;3!CL:0002619;6.20e-09;3!CL:0000988;7.31e-09;177!CL:0000767;1.09e-08;3!CL:0000875;2.76e-08;3!CL:0002396;2.76e-08;3!CL:0000226;5.12e-08;3!CL:0000842;5.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.25e-117,48;CL:0000234,2.25e-117,48;CL:0000766,6.44e-116,72;CL:0002194,1.16e-108,59;CL:0000576,1.16e-108,59;CL:0000040,1.16e-108,59;CL:0000559,1.16e-108,59;CL:0002009,1.02e-104,61;CL:0000860,1.34e-102,42;CL:0002057,1.34e-102,42;CL:0000839,6.87e-96,66;CL:0000557,2.80e-94,67;CL:0000763,8.50e-73,108;CL:0000049,8.50e-73,108;CL:0000738,1.06e-63,136;CL:0002087,1.24e-58,115;CL:0002031,4.42e-49,120;CL:0000037,8.83e-49,168;CL:0002032,6.14e-46,161;CL:0000837,6.14e-46,161;CL:0000988,1.50e-45,177;CL:0002393,2.26e-17,9;CL:0002397,2.26e-17,9;CL:0000094,8.72e-17,8;CL:0000235,2.18e-15,6;CL:0000134,2.34e-15,354;CL:0002320,8.96e-15,361;CL:0000219,1.00e-12,386;CL:0000081,6.90e-12,11;CL:0000048,3.11e-10,427;CL:0000723,6.83e-10,433;CL:0000775,1.15e-09,3;CL:0000034,1.88e-09,441;CL:0002619,6.46e-09,3;CL:0000767,1.08e-08,3;CL:0000875,2.52e-08,3;CL:0002396,2.52e-08,3;CL:0000226,5.32e-08,3;CL:0000842,5.32e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-72;42!CL:0000049;1.77e-22;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-69!102;UBERON:0003061!1.11e-69!102;UBERON:0002193!1.15e-63!112;UBERON:0002371!3.32e-55!80;UBERON:0001474!4.24e-50!86;UBERON:0002405!1.17e-43!115;UBERON:0004765!5.35e-40!101;UBERON:0001434!5.35e-40!101;UBERON:0003081!5.91e-26!216;UBERON:0002204!7.13e-20!167;UBERON:0000178!5.16e-12!15;UBERON:0000179!5.16e-12!15;UBERON:0000463!5.16e-12!15;UBERON:0007023!3.07e-11!115;UBERON:0000926!1.83e-09!448;UBERON:0004120!1.83e-09!448;UBERON:0006603!1.83e-09!448 | |ontology_enrichment_uberon=UBERON:0002390!1.11e-69!102;UBERON:0003061!1.11e-69!102;UBERON:0002193!1.15e-63!112;UBERON:0002371!3.32e-55!80;UBERON:0001474!4.24e-50!86;UBERON:0002405!1.17e-43!115;UBERON:0004765!5.35e-40!101;UBERON:0001434!5.35e-40!101;UBERON:0003081!5.91e-26!216;UBERON:0002204!7.13e-20!167;UBERON:0000178!5.16e-12!15;UBERON:0000179!5.16e-12!15;UBERON:0000463!5.16e-12!15;UBERON:0007023!3.07e-11!115;UBERON:0000926!1.83e-09!448;UBERON:0004120!1.83e-09!448;UBERON:0006603!1.83e-09!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.84e-19;15!UBERON:0000179;5.84e-19;15!UBERON:0000463;5.84e-19;15!UBERON:0002390;1.28e-10;32!UBERON:0002193;6.34e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.73e-100,98;UBERON:0003061,5.73e-100,98;UBERON:0002193,1.37e-92,108;UBERON:0002371,1.14e-81,76;UBERON:0001474,8.72e-75,82;UBERON:0002405,4.60e-73,93;UBERON:0004765,5.10e-67,90;UBERON:0001434,4.84e-59,100;UBERON:0003081,1.19e-40,203;UBERON:0002204,3.82e-30,167;UBERON:0000926,7.91e-21,315;UBERON:0004120,7.91e-21,315;UBERON:0006603,7.91e-21,315;UBERON:0000178,6.06e-19,15;UBERON:0000179,6.06e-19,15;UBERON:0000463,6.06e-19,15;UBERON:0002384,5.58e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,2.68680578668049,21.2098088943024,0,0,0,0,0,0,2.21598163412751,4.21143339687298,0.651032612147555,3.35873211359887,11.6601719766833,9.5302960024649,24.8630988313056,17.0044174659964,7.27752183563449,25.1023359858139,9.04569353648017,3.40677007984614,33.9477022940138,23.8229457072064,7.09446689665756,18.961012440514,10.973239620925,2.70852973188684,21.6478690473995,10.9162460023138,2.9214052977861,18.6711174346251,9.30694178520671,5.11469700639233,37.6030482212856,20.3452930774064,15.7703157697097,17.9929727949722,6.24123747160254,3.11411124497787,35.6773104664575,15.644487552606,8.25317609879443,21.7943820948013,7.36555271975129,5.37986058649504,11.1965301745329,5.31510749912609,4.61249020118427,9.88491954089157,5.10601435661121,4.17886525412408,5.13022938734247,3.58050018958362,3.83594722905731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.696518949197069,2.26028532882071,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15542515218493,3.97807250736704,5.7966153292604,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,10.4860983352606,23.932916736322,16.1622050240054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.66714141391649,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,6.08937131078603,6.117097657139,6.83576624608995,3.57347663186684,3.70226045777575,11.0240462902762,4.32025149790492,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,1.60181118851542,0.157204305099666,0.828478110694391,5.95399226174341,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,5.35708332485165,1.67590508731301,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0.318235791390825,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,2.68680578668049,21.2098088943024,0,0,0,0,0,0,2.21598163412751,4.21143339687298,0.651032612147555,3.35873211359887,11.6601719766833,9.5302960024649,24.8630988313056,17.0044174659964,7.27752183563449,25.1023359858139,9.04569353648017,3.40677007984614,33.9477022940138,23.8229457072064,7.09446689665756,18.961012440514,10.973239620925,2.70852973188684,21.6478690473995,10.9162460023138,2.9214052977861,18.6711174346251,9.30694178520671,5.11469700639233,37.6030482212856,20.3452930774064,15.7703157697097,17.9929727949722,6.24123747160254,3.11411124497787,35.6773104664575,15.644487552606,8.25317609879443,21.7943820948013,7.36555271975129,5.37986058649504,11.1965301745329,5.31510749912609,4.61249020118427,9.88491954089157,5.10601435661121,4.17886525412408,5.13022938734247,3.58050018958362,3.83594722905731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,1.24930726552346,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.696518949197069,2.26028532882071,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15542515218493,3.97807250736704,5.7966153292604,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,10.4860983352606,23.932916736322,16.1622050240054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.66714141391649,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,6.08937131078603,6.117097657139,6.83576624608995,3.57347663186684,3.70226045777575,11.0240462902762,4.32025149790492,7.13812658664843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,1.60181118851542,0.157204305099666,0.828478110694391,5.95399226174341,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,5.35708332485165,1.67590508731301,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.303114792872958,0,0,0,0,0,0.193766729508018,0.248298857183432,0,0.318235791390825,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@LILRB3 | |short_description=p1@LILRB3 | ||
}} | }} |
Latest revision as of 21:45, 19 September 2015
Short description: | p1@LILRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LILRB3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 23bp_to_ENST00000346401_5end |
EntrezGene: | LILRB3 |
HGNC: | 6607 |
UniProt: | F8W6G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.73e-100 | 98 |
blood island | 5.73e-100 | 98 |
hemolymphoid system | 1.37e-92 | 108 |
bone marrow | 1.14e-81 | 76 |
bone element | 8.72e-75 | 82 |
immune system | 4.60e-73 | 93 |
skeletal element | 5.10e-67 | 90 |
skeletal system | 4.84e-59 | 100 |
lateral plate mesoderm | 1.19e-40 | 203 |
musculoskeletal system | 3.82e-30 | 167 |
mesoderm | 7.91e-21 | 315 |
mesoderm-derived structure | 7.91e-21 | 315 |
presumptive mesoderm | 7.91e-21 | 315 |
blood | 6.06e-19 | 15 |
haemolymphatic fluid | 6.06e-19 | 15 |
organism substance | 6.06e-19 | 15 |
connective tissue | 5.58e-14 | 371 |