FFCP PHASE1:Hg19::chr12:65174246..65174307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23329 | |EntrezGene=23329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29164 | |HGNC=29164 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2I9 | |UniProt=Q9Y2I9 | ||
|association_with_transcript=-281bp_to_ENST00000229088_5end | |association_with_transcript=-281bp_to_ENST00000229088_5end | ||
|cluster_id=chr12:65174246..65174307,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_TBC1D30_5end | |description=CAGE_peak_3_at_TBC1D30_5end | ||
|id=chr12:65174246..65174307,+ | |id=chr12:65174246..65174307,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.62e-25!45;CL:0002057!5.56e-24!42;CL:0000557!3.72e-19!71;CL:0000766!4.29e-19!76;CL:0002009!8.04e-19!65;CL:0002194!1.08e-17!63;CL:0000576!1.08e-17!63;CL:0000040!1.08e-17!63;CL:0000559!1.08e-17!63;CL:0000839!1.55e-17!70;CL:0000763!7.16e-11!112;CL:0000049!7.16e-11!112;CL:0000738!4.23e-07!140 | |ontology_enrichment_celltype=CL:0000860!3.62e-25!45;CL:0002057!5.56e-24!42;CL:0000557!3.72e-19!71;CL:0000766!4.29e-19!76;CL:0002009!8.04e-19!65;CL:0002194!1.08e-17!63;CL:0000576!1.08e-17!63;CL:0000040!1.08e-17!63;CL:0000559!1.08e-17!63;CL:0000839!1.55e-17!70;CL:0000763!7.16e-11!112;CL:0000049!7.16e-11!112;CL:0000738!4.23e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-39;33!CL:0002057;1.22e-39;33!CL:0000473;1.05e-31;39!CL:0000234;1.05e-31;39!CL:0000576;5.61e-18;48!CL:0000766;2.64e-15;69!CL:0000123;7.89e-09;2!CL:0000242;7.89e-09;2!CL:0000763;4.80e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-34,42;CL:0002057,2.85e-34,42;CL:0000473,2.18e-32,48;CL:0000234,2.18e-32,48;CL:0000766,5.23e-30,72;CL:0000839,7.74e-26,66;CL:0000557,2.30e-25,67;CL:0002194,9.64e-25,59;CL:0000576,9.64e-25,59;CL:0000040,9.64e-25,59;CL:0000559,9.64e-25,59;CL:0002009,9.31e-24,61;CL:0000763,2.38e-19,108;CL:0000049,2.38e-19,108;CL:0000738,5.81e-14,136;CL:0002031,1.37e-11,120;CL:0002032,9.26e-11,161;CL:0000837,9.26e-11,161;CL:0002087,4.09e-10,115;CL:0000037,4.87e-10,168;CL:0000988,3.37e-09,177;CL:0000242,7.92e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.19e-26;42 | |||
|ontology_enrichment_disease=DOID:305!2.57e-11!106;DOID:0050687!1.50e-07!143 | |ontology_enrichment_disease=DOID:305!2.57e-11!106;DOID:0050687!1.50e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.25e-15!80;UBERON:0002390!7.22e-15!102;UBERON:0003061!7.22e-15!102;UBERON:0002193!1.39e-14!112;UBERON:0001474!4.82e-14!86;UBERON:0002405!2.59e-11!115;UBERON:0004765!1.54e-09!101;UBERON:0001434!1.54e-09!101;UBERON:0007023!6.40e-09!115;UBERON:0000468!1.11e-08!659;UBERON:0000062!7.42e-08!511;UBERON:0000922!7.72e-08!612;UBERON:0000467!1.78e-07!625;UBERON:0000480!2.22e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.07e-08;2!UBERON:0001829;8.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.14e-21,76;UBERON:0001474,1.18e-19,82;UBERON:0002405,3.51e-18,93;UBERON:0004765,2.20e-17,90;UBERON:0002390,1.73e-15,98;UBERON:0003061,1.73e-15,98;UBERON:0001434,4.62e-15,100;UBERON:0002193,8.25e-15,108;UBERON:0000007,5.54e-08,2;UBERON:0001829,7.36e-08,2;UBERON:0002204,8.72e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0.647787332037959,0,0.436194716338694,0.377875943688809,0,0.929716147622738,1.23350366406548,0.619412741790207,18.1246207162955,13.8326781525714,19.391542850864,1.72372840368309,1.29096936716765,1.35426486594342,0.564727018627814,0.272906150057846,1.57306439111559,0.612167784741805,0.962787081228281,1.91801137739712,18.4716728104561,15.7576289521089,19.1801137739712,4.35313857942876,4.53908179752912,4.35975574296902,16.8336605722018,9.90817544998383,10.6422533905507,2.42159801053347,3.31449872388808,2.84816148696796,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0,0,0.39783335439818,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0,0.516833518338658,0.71153252537342,1.00416183829401,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0.673588117878509,0.112611480483322,3.06633274931766,0,0.366403487860815,1.31780417436063,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0.813357600086629,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.55146986366197,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,1.03664057770386,1.15295962733569,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0.276242966807689,0,0,0,0,0,0,0,0.105551628892876,0,0.340187410553031,0,1.54227252690289,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0.495854746082934,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0.822724546172388,0.648473311192717,0,0.79312517629427,0.213648142254946,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0.586032717087576,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0.718946809178615,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.962059999958153,0,0.910347586283997,0.254253650292766,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,1.97292201424695,3.62972148145992,0,0.252746318513952,0.60129367765797,0.72581733978073,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.34823682632161,0.52418000472609,0,0.0967563312890851,0.365446585430928,0.492692742319255,0.193978032976839,0.264768380074501,0.451961481561065,0,0,0.126621591911757,0.782205530939212,0,0.426905989478705,0,2.01726584015748,0.80175617316141,0,0.720273989940749,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,1.18112977817699,0,0,0,0.482259445395058,0.137539436597234,0,0.449947783103001,0.77380195455795,0.0607495566580247,0.670869375198532,0.0788057072991982,0.786818822024972,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0.704815022316672,1.06787412567695,0.628817220398664,0.414239055347196,0,0,0,0,1.63205341010842,0,0.306345576763462,0,0.471162288750703,0,0.122026264901963,0,0,0,0,0.553394539744923,0,0,0,0,11.708372645172,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0.194860308839388,1.32864840313363,0.327130788511688,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,1.27894371303652,0,0.314531883711793,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,1.42769420259154,0.294443155503077,0.471878893390961,0,0,0,0,0,0.150420656698515,0,3.12605604493237,0,0,0.295712172434091,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,1.09651553371436,0.496211178389294,0,0.2555248552791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| ||
|short_description=p3@TBC1D30 | |short_description=p3@TBC1D30 | ||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p3@TBC1D30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBC1D30_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -281bp_to_ENST00000229088_5end |
EntrezGene: | TBC1D30 |
HGNC: | 29164 |
UniProt: | Q9Y2I9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.85e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.85e-34 | 42 |
defensive cell | 2.18e-32 | 48 |
phagocyte | 2.18e-32 | 48 |
myeloid leukocyte | 5.23e-30 | 72 |
myeloid lineage restricted progenitor cell | 7.74e-26 | 66 |
granulocyte monocyte progenitor cell | 2.30e-25 | 67 |
monopoietic cell | 9.64e-25 | 59 |
monocyte | 9.64e-25 | 59 |
monoblast | 9.64e-25 | 59 |
promonocyte | 9.64e-25 | 59 |
macrophage dendritic cell progenitor | 9.31e-24 | 61 |
myeloid cell | 2.38e-19 | 108 |
common myeloid progenitor | 2.38e-19 | 108 |
leukocyte | 5.81e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.37e-11 | 120 |
hematopoietic oligopotent progenitor cell | 9.26e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.26e-11 | 161 |
nongranular leukocyte | 4.09e-10 | 115 |
hematopoietic stem cell | 4.87e-10 | 168 |
hematopoietic cell | 3.37e-09 | 177 |
Merkel cell | 7.92e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.14e-21 | 76 |
bone element | 1.18e-19 | 82 |
immune system | 3.51e-18 | 93 |
skeletal element | 2.20e-17 | 90 |
hematopoietic system | 1.73e-15 | 98 |
blood island | 1.73e-15 | 98 |
skeletal system | 4.62e-15 | 100 |
hemolymphoid system | 8.25e-15 | 108 |
pituitary gland | 5.54e-08 | 2 |
major salivary gland | 7.36e-08 | 2 |
musculoskeletal system | 8.72e-07 | 167 |