FFCP PHASE1:Hg19::chr1:93913606..93913625,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54874 | |EntrezGene=54874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20851 | |HGNC=20851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000370256_5end | |association_with_transcript=-32bp_to_ENST00000370256_5end | ||
|cluster_id=chr1:93913606..93913625,+ | |||
|coexpression_cluster_id=C2604 | |||
|description=CAGE_peak_3_at_FNBP1L_5end | |description=CAGE_peak_3_at_FNBP1L_5end | ||
|id=chr1:93913606..93913625,+ | |id=chr1:93913606..93913625,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.69e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.58e-08;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.33e-12!143;DOID:3095!3.03e-11!22;DOID:2994!3.03e-11!22;DOID:305!6.16e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.42e-14;22!DOID:2994;1.42e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.37e-14,22;DOID:2994,1.37e-14,22;DOID:0050687,1.04e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.97e-25!94;UBERON:0001016!4.97e-25!94;UBERON:0007023!5.34e-24!115;UBERON:0001017!1.81e-23!82;UBERON:0005743!2.96e-23!86;UBERON:0002346!7.13e-20!90;UBERON:0003075!1.01e-18!86;UBERON:0007284!1.01e-18!86;UBERON:0000924!1.31e-18!173;UBERON:0006601!1.31e-18!173;UBERON:0001049!1.50e-17!57;UBERON:0005068!1.50e-17!57;UBERON:0006241!1.50e-17!57;UBERON:0007135!1.50e-17!57;UBERON:0004121!1.53e-17!169;UBERON:0000955!5.44e-17!69;UBERON:0006238!5.44e-17!69;UBERON:0002616!1.66e-15!59;UBERON:0000033!1.44e-13!123;UBERON:0003080!1.47e-13!42;UBERON:0000153!4.17e-13!129;UBERON:0007811!4.17e-13!129;UBERON:0002780!5.06e-13!41;UBERON:0001890!5.06e-13!41;UBERON:0006240!5.06e-13!41;UBERON:0003056!3.10e-12!61;UBERON:0002020!9.60e-11!34;UBERON:0003528!9.60e-11!34;UBERON:0001893!2.38e-10!34;UBERON:0002791!2.69e-10!33;UBERON:0000468!3.24e-10!659;UBERON:0001869!1.70e-09!32;UBERON:0000922!4.84e-09!612;UBERON:0000481!4.20e-08!347;UBERON:0000956!9.34e-08!25;UBERON:0000203!9.34e-08!25;UBERON:0002050!2.34e-07!605;UBERON:0005423!2.34e-07!605;UBERON:0000923!4.53e-07!604;UBERON:0005291!4.53e-07!604;UBERON:0006598!4.53e-07!604;UBERON:0002532!4.53e-07!604;UBERON:0000467!9.36e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.10e-11;49!UBERON:0002780;6.18e-11;41!UBERON:0001890;6.18e-11;41!UBERON:0000073;3.96e-10;53!UBERON:0002616;3.96e-10;53!UBERON:0001016;1.17e-09;83!UBERON:0002791;3.47e-09;32!UBERON:0003528;4.51e-09;34!UBERON:0002020;4.51e-09;34!UBERON:0001869;9.18e-09;32!UBERON:0001893;9.20e-09;34!UBERON:0001017;1.41e-08;75!UBERON:0007023;1.66e-08;114!UBERON:0000955;4.34e-08;68!UBERON:0000956;7.19e-07;25!UBERON:0000203;7.19e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.25e-27,89;UBERON:0001017,5.01e-25,81;UBERON:0007023,1.00e-24,114;UBERON:0002346,1.06e-20,86;UBERON:0003075,3.14e-19,82;UBERON:0007284,3.14e-19,82;UBERON:0001049,9.61e-19,56;UBERON:0005068,9.61e-19,56;UBERON:0006241,9.61e-19,56;UBERON:0007135,9.61e-19,56;UBERON:0000955,6.32e-17,68;UBERON:0006238,6.32e-17,68;UBERON:0000073,9.84e-17,53;UBERON:0002616,9.84e-17,53;UBERON:0004121,1.72e-16,171;UBERON:0000924,1.72e-16,171;UBERON:0006601,1.72e-16,171;UBERON:0011216,4.53e-16,223;UBERON:0002780,8.47e-14,41;UBERON:0001890,8.47e-14,41;UBERON:0003080,8.47e-14,41;UBERON:0006240,8.47e-14,41;UBERON:0010314,3.12e-13,132;UBERON:0003056,1.26e-12,61;UBERON:0010371,1.86e-12,104;UBERON:0003528,7.69e-11,34;UBERON:0002020,7.69e-11,34;UBERON:0001893,2.22e-10,34;UBERON:0002791,9.24e-10,32;UBERON:0001869,2.58e-09,32;UBERON:0000956,4.73e-07,25;UBERON:0000203,4.73e-07,25 | |||
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| ||
|short_description=p3@FNBP1L | |short_description=p3@FNBP1L | ||
}} | }} |
Latest revision as of 21:40, 19 September 2015
Short description: | p3@FNBP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FNBP1L_5end |
Coexpression cluster: | C2604_Mast_occipital_parietal_temporal_duodenum_Neural_hepatoblastoma |
Association with transcript: | -32bp_to_ENST00000370256_5end |
EntrezGene: | FNBP1L |
HGNC: | 20851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.69e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.25e-27 | 89 |
central nervous system | 5.01e-25 | 81 |
adult organism | 1.00e-24 | 114 |
neurectoderm | 1.06e-20 | 86 |
neural plate | 3.14e-19 | 82 |
presumptive neural plate | 3.14e-19 | 82 |
neural tube | 9.61e-19 | 56 |
neural rod | 9.61e-19 | 56 |
future spinal cord | 9.61e-19 | 56 |
neural keel | 9.61e-19 | 56 |
brain | 6.32e-17 | 68 |
future brain | 6.32e-17 | 68 |
regional part of nervous system | 9.84e-17 | 53 |
regional part of brain | 9.84e-17 | 53 |
ectoderm-derived structure | 1.72e-16 | 171 |
ectoderm | 1.72e-16 | 171 |
presumptive ectoderm | 1.72e-16 | 171 |
organ system subdivision | 4.53e-16 | 223 |
regional part of forebrain | 8.47e-14 | 41 |
forebrain | 8.47e-14 | 41 |
anterior neural tube | 8.47e-14 | 41 |
future forebrain | 8.47e-14 | 41 |
structure with developmental contribution from neural crest | 3.12e-13 | 132 |
pre-chordal neural plate | 1.26e-12 | 61 |
ecto-epithelium | 1.86e-12 | 104 |
brain grey matter | 7.69e-11 | 34 |
gray matter | 7.69e-11 | 34 |
telencephalon | 2.22e-10 | 34 |
regional part of telencephalon | 9.24e-10 | 32 |
cerebral hemisphere | 2.58e-09 | 32 |
cerebral cortex | 4.73e-07 | 25 |
pallium | 4.73e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.37e-14 | 22 |
germ cell cancer | 1.37e-14 | 22 |
cell type cancer | 1.04e-07 | 143 |