FFCP PHASE1:Hg19::chr15:91643336..91643337,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9899 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16874 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=153bp_to_uc002bqt.2,uc002bqu.3,uc010uqv.1_5end | |||
|cluster_id=chr15:91643336..91643337,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_19_at_SV2B_5end | |||
|id=chr15:91643336..91643337,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!8.39e-52!69;UBERON:0006238!8.39e-52!69;UBERON:0005743!1.21e-50!86;UBERON:0001017!1.35e-49!82;UBERON:0001049!1.34e-46!57;UBERON:0005068!1.34e-46!57;UBERON:0006241!1.34e-46!57;UBERON:0007135!1.34e-46!57;UBERON:0000073!2.35e-45!94;UBERON:0001016!2.35e-45!94;UBERON:0002616!7.23e-45!59;UBERON:0002020!3.16e-44!34;UBERON:0003528!3.16e-44!34;UBERON:0001869!3.05e-42!32;UBERON:0002619!4.22e-42!22;UBERON:0002780!4.89e-41!41;UBERON:0001890!4.89e-41!41;UBERON:0006240!4.89e-41!41;UBERON:0003075!5.78e-41!86;UBERON:0007284!5.78e-41!86;UBERON:0001950!3.82e-40!20;UBERON:0003080!5.55e-40!42;UBERON:0007023!7.40e-40!115;UBERON:0001893!1.31e-39!34;UBERON:0002346!6.70e-39!90;UBERON:0000956!6.84e-37!25;UBERON:0000203!6.84e-37!25;UBERON:0002791!4.48e-36!33;UBERON:0003056!9.22e-33!61;UBERON:0000200!1.83e-31!6;UBERON:0000033!1.87e-31!123;UBERON:0000153!1.00e-29!129;UBERON:0007811!1.00e-29!129;UBERON:0004121!1.41e-24!169;UBERON:0000924!7.21e-24!173;UBERON:0006601!7.21e-24!173;UBERON:0001872!7.65e-18!5;UBERON:0002771!3.33e-16!3;UBERON:0002298!1.01e-15!8;UBERON:0000988!1.41e-15!3;UBERON:0001870!5.16e-12!2;UBERON:0001905!7.13e-12!2;UBERON:0002757!7.13e-12!2;UBERON:0010134!7.13e-12!2;UBERON:0002784!7.13e-12!2;UBERON:0005408!7.13e-12!2;UBERON:0001899!7.13e-12!2;UBERON:0000064!2.19e-11!219;UBERON:0000025!3.18e-11!194;UBERON:0002360!7.88e-11!2;UBERON:0000094!7.88e-11!2;UBERON:0007645!7.88e-11!2;UBERON:0002148!1.02e-10!2;UBERON:0009662!1.02e-10!2;UBERON:0001871!1.31e-10!7;UBERON:0004733!2.07e-10!12;UBERON:0002028!2.07e-10!12;UBERON:0007277!2.07e-10!12;UBERON:0004732!1.36e-09!13;UBERON:0002308!4.85e-09!9;UBERON:0000125!4.85e-09!9;UBERON:0004111!6.64e-09!241;UBERON:0003076!2.79e-08!15;UBERON:0003057!2.79e-08!15;UBERON:0000483!5.76e-08!309;UBERON:0001896!6.66e-08!3;UBERON:0005290!6.66e-08!3;UBERON:0010096!6.66e-08!3;UBERON:0000119!7.86e-08!312;UBERON:0000062!1.67e-07!511;UBERON:0006331!1.98e-07!3;UBERON:0000475!2.98e-07!365;UBERON:0002702!5.58e-07!1;UBERON:0002581!6.59e-07!1;UBERON:0002902!7.35e-07!1;UBERON:0009899!7.35e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;3.52e-50;2!UBERON:0001870;5.04e-34;3!UBERON:0001872;4.66e-21;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000200;8.34e-18;6!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0003528;1.90e-14;34!UBERON:0002020;1.90e-14;34!UBERON:0001869;1.90e-14;32!UBERON:0002791;1.77e-12;32!UBERON:0001893;1.77e-12;34!UBERON:0002780;3.68e-09;41!UBERON:0001890;3.68e-09;41!UBERON:0000073;8.24e-08;53!UBERON:0002616;8.24e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.74e-50,2;UBERON:0001870,4.27e-34,3;UBERON:0001872,5.15e-21,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000200,7.67e-18,6;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p19@SV2B | |||
}} |
Latest revision as of 21:34, 19 September 2015
Short description: | p19@SV2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SV2B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 153bp_to_uc002bqt.2, uc002bqu.3, uc010uqv.1_5end |
EntrezGene: | SV2B |
HGNC: | 16874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 2.74e-50 | 2 |
frontal cortex | 4.27e-34 | 3 |
parietal lobe | 5.15e-21 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
gyrus | 7.67e-18 | 6 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |