FFCP PHASE1:Hg19::chr12:65146669..65146704,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2799 | |EntrezGene=2799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4422 | |HGNC=4422 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000418919,uc001ssf.2_5end | |||
|cluster_id=chr12:65146669..65146704,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_GNS_5end | |||
|id=chr12:65146669..65146704,- | |||
|ontology_enrichment_celltype=CL:0002139!3.43e-23!24;CL:0000071!8.59e-18!18;CL:0002546!8.59e-18!18;CL:0000115!1.56e-14!35;CL:0002274!2.29e-14!5;CL:0000457!2.29e-14!5;CL:0002191!2.29e-14!5;CL:0000097!2.29e-14!5;CL:0000831!2.29e-14!5;CL:0002028!2.29e-14!5;CL:0002078!1.03e-10!44;CL:1000413!3.18e-10!9;CL:0000213!1.51e-09!57;CL:0000215!1.51e-09!57;CL:0002144!1.78e-08!3;CL:0000163!9.93e-08!9;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112;CL:0005020!6.03e-07!6;CL:0002138!6.03e-07!6;CL:0005022!6.03e-07!6;CL:0000839!6.68e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.49e-67;5!CL:0000163;2.54e-37;9!CL:0000151;1.13e-08;36!CL:0002545;7.78e-08;2!CL:0000763;3.26e-07;100!CL:0000071;3.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.49e-67,5;CL:0002028,5.49e-67,5;CL:0000163,2.54e-37,9;CL:0000763,1.56e-13,108;CL:0000049,1.56e-13,108;CL:0000151,2.40e-09,36;CL:0002032,1.13e-08,161;CL:0000837,1.13e-08,161;CL:0000037,2.95e-08,168;CL:0002545,8.60e-08,2;CL:0000988,9.07e-08,177;CL:0000071,3.69e-07,18;CL:0002546,3.69e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.18e-15;8!DOID:8692;1.28e-14;31!DOID:8552;2.25e-14;1!DOID:1240;1.34e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.16e-15,8;DOID:8692,4.75e-15,31;DOID:8552,1.84e-14,1;DOID:1240,6.59e-12,39;DOID:2531,4.94e-09,51;DOID:0060083,4.94e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.59e-18!18;UBERON:0004638!8.59e-18!18;UBERON:0004852!8.59e-18!18;UBERON:0000487!5.17e-14!22;UBERON:0006914!5.58e-12!25;UBERON:0003915!3.18e-10!9;UBERON:0004700!3.18e-10!9;UBERON:0001917!3.18e-10!9;UBERON:0000055!2.79e-09!69;UBERON:0001915!1.78e-08!3;UBERON:0001982!1.78e-08!3;UBERON:0002049!1.71e-07!79;UBERON:0007798!1.71e-07!79;UBERON:0003081!3.64e-07!216;UBERON:0001981!9.57e-07!60;UBERON:0007500!9.57e-07!60;UBERON:0004537!9.57e-07!60;UBERON:0006965!9.57e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;7.78e-08;2!UBERON:0001515;7.78e-08;2!UBERON:0004638;3.58e-07;18!UBERON:0001986;3.58e-07;18!UBERON:0004852;3.58e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,8.60e-08,2;UBERON:0001515,8.60e-08,2;UBERON:0004638,3.69e-07,18;UBERON:0001986,3.69e-07,18;UBERON:0004852,3.69e-07,18 | |||
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| ||
|short_description=p3@GNS | |||
}} | }} |
Latest revision as of 21:33, 19 September 2015
Short description: | p3@GNS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNS_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -18bp_to_ENST00000418919, uc001ssf.2_5end |
EntrezGene: | GNS |
HGNC: | 4422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.49e-67 | 5 |
basophil mast progenitor cell | 5.49e-67 | 5 |
endocrine cell | 2.54e-37 | 9 |
myeloid cell | 1.56e-13 | 108 |
common myeloid progenitor | 1.56e-13 | 108 |
secretory cell | 2.40e-09 | 36 |
hematopoietic oligopotent progenitor cell | 1.13e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-08 | 161 |
hematopoietic stem cell | 2.95e-08 | 168 |
thoracic aorta endothelial cell | 8.60e-08 | 2 |
hematopoietic cell | 9.07e-08 | 177 |
blood vessel endothelial cell | 3.69e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 8.60e-08 | 2 |
thoracic aorta | 8.60e-08 | 2 |
blood vessel endothelium | 3.69e-07 | 18 |
endothelium | 3.69e-07 | 18 |
cardiovascular system endothelium | 3.69e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.16e-15 | 8 |
myeloid leukemia | 4.75e-15 | 31 |
chronic myeloid leukemia | 1.84e-14 | 1 |
leukemia | 6.59e-12 | 39 |
hematologic cancer | 4.94e-09 | 51 |
immune system cancer | 4.94e-09 | 51 |