FFCP PHASE1:Hg19::chrX:148579808..148579832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3423 | |EntrezGene=3423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5389 | |HGNC=5389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000466019_5end | |association_with_transcript=-11bp_to_ENST00000466019_5end | ||
|cluster_id=chrX:148579808..148579832,- | |||
|description=CAGE_peak_17_at_IDS_5end | |description=CAGE_peak_17_at_IDS_5end | ||
|id=chrX:148579808..148579832,- | |id=chrX:148579808..148579832,- | ||
|ontology_enrichment_celltype=CL:0002057!4.04e-13!42;CL:0000860!1.71e-11!45;CL:0000557!1.42e-09!71;CL:0002009!5.31e-09!65;CL:0000766!6.65e-09!76;CL:0000839!2.43e-08!70;CL:0000738!3.13e-08!140;CL:0002194!4.66e-08!63;CL:0000576!4.66e-08!63;CL:0000040!4.66e-08!63;CL:0000559!4.66e-08!63;CL:0002031!2.52e-07!124;CL:0002087!8.73e-07!119 | |ontology_enrichment_celltype=CL:0002057!4.04e-13!42;CL:0000860!1.71e-11!45;CL:0000557!1.42e-09!71;CL:0002009!5.31e-09!65;CL:0000766!6.65e-09!76;CL:0000839!2.43e-08!70;CL:0000738!3.13e-08!140;CL:0002194!4.66e-08!63;CL:0000576!4.66e-08!63;CL:0000040!4.66e-08!63;CL:0000559!4.66e-08!63;CL:0002031!2.52e-07!124;CL:0002087!8.73e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.48e-09;33!CL:0002057;4.48e-09;33!CL:0000473;4.56e-07;39!CL:0000234;4.56e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.76e-07,42;CL:0002057,5.76e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.41e-20!34;UBERON:0003528!5.41e-20!34;UBERON:0001893!2.07e-19!34;UBERON:0001049!2.41e-19!57;UBERON:0005068!2.41e-19!57;UBERON:0006241!2.41e-19!57;UBERON:0007135!2.41e-19!57;UBERON:0002791!9.55e-19!33;UBERON:0001869!1.18e-18!32;UBERON:0002780!3.86e-18!41;UBERON:0001890!3.86e-18!41;UBERON:0006240!3.86e-18!41;UBERON:0003080!2.14e-17!42;UBERON:0002616!4.52e-17!59;UBERON:0007023!5.93e-17!115;UBERON:0002619!2.47e-16!22;UBERON:0005743!5.69e-16!86;UBERON:0001017!6.40e-16!82;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0000955!1.94e-15!69;UBERON:0006238!1.94e-15!69;UBERON:0001950!1.57e-14!20;UBERON:0000073!4.71e-14!94;UBERON:0001016!4.71e-14!94;UBERON:0003075!4.73e-12!86;UBERON:0007284!4.73e-12!86;UBERON:0002346!2.19e-11!90;UBERON:0003056!2.74e-10!61;UBERON:0002371!1.24e-07!80;UBERON:0002390!6.51e-07!102;UBERON:0003061!6.51e-07!102 | |ontology_enrichment_uberon=UBERON:0002020!5.41e-20!34;UBERON:0003528!5.41e-20!34;UBERON:0001893!2.07e-19!34;UBERON:0001049!2.41e-19!57;UBERON:0005068!2.41e-19!57;UBERON:0006241!2.41e-19!57;UBERON:0007135!2.41e-19!57;UBERON:0002791!9.55e-19!33;UBERON:0001869!1.18e-18!32;UBERON:0002780!3.86e-18!41;UBERON:0001890!3.86e-18!41;UBERON:0006240!3.86e-18!41;UBERON:0003080!2.14e-17!42;UBERON:0002616!4.52e-17!59;UBERON:0007023!5.93e-17!115;UBERON:0002619!2.47e-16!22;UBERON:0005743!5.69e-16!86;UBERON:0001017!6.40e-16!82;UBERON:0000956!1.12e-15!25;UBERON:0000203!1.12e-15!25;UBERON:0000955!1.94e-15!69;UBERON:0006238!1.94e-15!69;UBERON:0001950!1.57e-14!20;UBERON:0000073!4.71e-14!94;UBERON:0001016!4.71e-14!94;UBERON:0003075!4.73e-12!86;UBERON:0007284!4.73e-12!86;UBERON:0002346!2.19e-11!90;UBERON:0003056!2.74e-10!61;UBERON:0002371!1.24e-07!80;UBERON:0002390!6.51e-07!102;UBERON:0003061!6.51e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.57e-18;22!UBERON:0000956;5.40e-16;25!UBERON:0000203;5.40e-16;25!UBERON:0001950;9.55e-15;20!UBERON:0003528;9.64e-15;34!UBERON:0002020;9.64e-15;34!UBERON:0002791;1.15e-14;32!UBERON:0001869;1.31e-14;32!UBERON:0001893;1.33e-13;34!UBERON:0002780;4.97e-10;41!UBERON:0001890;4.97e-10;41!UBERON:0002022;5.29e-10;1!UBERON:0000073;1.56e-08;53!UBERON:0002616;1.56e-08;53!UBERON:0000349;3.47e-08;5!UBERON:0002021;5.11e-08;5!UBERON:0000955;2.70e-07;68!UBERON:0001017;3.90e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.11e-19,34;UBERON:0002020,5.11e-19,34;UBERON:0002619,3.15e-18,22;UBERON:0002791,3.99e-16,32;UBERON:0001869,3.99e-16,32;UBERON:0000956,4.84e-16,25;UBERON:0000203,4.84e-16,25;UBERON:0001893,3.81e-15,34;UBERON:0001950,8.49e-15,20;UBERON:0002780,1.88e-12,41;UBERON:0001890,1.88e-12,41;UBERON:0003080,1.88e-12,41;UBERON:0006240,1.88e-12,41;UBERON:0000073,7.05e-12,53;UBERON:0002616,7.05e-12,53;UBERON:0001049,3.48e-11,56;UBERON:0005068,3.48e-11,56;UBERON:0006241,3.48e-11,56;UBERON:0007135,3.48e-11,56;UBERON:0001017,5.38e-11,81;UBERON:0000955,5.40e-11,68;UBERON:0006238,5.40e-11,68;UBERON:0001016,9.57e-10,89;UBERON:0002022,1.07e-09,1;UBERON:0000349,3.36e-08,5;UBERON:0003056,4.24e-08,61;UBERON:0002021,4.45e-08,5;UBERON:0007023,1.78e-07,114;UBERON:0003075,2.82e-07,82;UBERON:0007284,2.82e-07,82;UBERON:0002346,7.00e-07,86 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.651032612147555,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.485168122375632,0.464858073811369,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,0.709446689665756,1.37898272294647,1.29096936716765,0,0.564727018627814,0.272906150057846,0.674170453335254,1.22433556948361,0,0.639337125799041,0,0.797854630486527,0.852449501065388,0.870627715885752,0,1.24564449799115,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0,0.632924774881769,0.211255286311942,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0.589211814949674,0,0.270803863765016,0.25618263945135,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,1.33720097891754,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,0.749007023947182,0,1.24324654030811,0,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.13929437434833,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,2.98244294329889,0.984685914873589,0,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0.969332746095218,1.39152147242777,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0.173624994933292,0.885741385813839,1.20596438625408,0,0.331737779793674,0.591095237907095,1.31631238292384,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0.802577647298789,0.937057782901357,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.633107959558787,0,0,0.213452994739353,0.39961921916426,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,2.38568906942791,0.817220436669454,0.160753148465019,0,0,0.449947783103001,0.77380195455795,1.09349201984444,0,0.157611414598396,0.0524545881349981,0.211200673038813,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0.828478110694391,0,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,4.14889300666675,0.751145584238999,0,0.221858103073705,0.18628920882415,0,0,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782982875895635,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0.829550616910385,0.194860308839388,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.321146125482298,1.41696576325585,0.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| ||
|short_description=p17@IDS | |short_description=p17@IDS | ||
}} | }} |
Latest revision as of 21:29, 19 September 2015
Short description: | p17@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_IDS_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000466019_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.76e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.76e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.11e-19 | 34 |
gray matter | 5.11e-19 | 34 |
regional part of cerebral cortex | 3.15e-18 | 22 |
regional part of telencephalon | 3.99e-16 | 32 |
cerebral hemisphere | 3.99e-16 | 32 |
cerebral cortex | 4.84e-16 | 25 |
pallium | 4.84e-16 | 25 |
telencephalon | 3.81e-15 | 34 |
neocortex | 8.49e-15 | 20 |
regional part of forebrain | 1.88e-12 | 41 |
forebrain | 1.88e-12 | 41 |
anterior neural tube | 1.88e-12 | 41 |
future forebrain | 1.88e-12 | 41 |
regional part of nervous system | 7.05e-12 | 53 |
regional part of brain | 7.05e-12 | 53 |
neural tube | 3.48e-11 | 56 |
neural rod | 3.48e-11 | 56 |
future spinal cord | 3.48e-11 | 56 |
neural keel | 3.48e-11 | 56 |
central nervous system | 5.38e-11 | 81 |
brain | 5.40e-11 | 68 |
future brain | 5.40e-11 | 68 |
nervous system | 9.57e-10 | 89 |
insula | 1.07e-09 | 1 |
limbic system | 3.36e-08 | 5 |
pre-chordal neural plate | 4.24e-08 | 61 |
occipital lobe | 4.45e-08 | 5 |
adult organism | 1.78e-07 | 114 |
neural plate | 2.82e-07 | 82 |
presumptive neural plate | 2.82e-07 | 82 |
neurectoderm | 7.00e-07 | 86 |