FFCP PHASE1:Hg19::chr3:119813420..119813431,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4617 | |||
|TSSclassifier=strong | |||
|UniProt=P49841,Q6FI27 | |||
|association_with_transcript=-156bp_to_ENST00000264235,NM_001146156,NM_002093,uc003edn.2,uc003edo.2_5end | |||
|cluster_id=chr3:119813420..119813431,- | |||
|description=CAGE_peak_5_at_GSK3B_5end | |||
|id=chr3:119813420..119813431,- | |||
|ontology_enrichment_celltype=CL:0000066!6.76e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!3.74e-12!32;UBERON:0002020!1.35e-10!34;UBERON:0003528!1.35e-10!34;UBERON:0001893!1.73e-10!34;UBERON:0002619!3.00e-10!22;UBERON:0002791!6.67e-10!33;UBERON:0001950!1.36e-09!20;UBERON:0000956!2.14e-09!25;UBERON:0000203!2.14e-09!25;UBERON:0002780!2.22e-09!41;UBERON:0001890!2.22e-09!41;UBERON:0006240!2.22e-09!41;UBERON:0003080!3.15e-09!42;UBERON:0001017!3.62e-08!82;UBERON:0005743!8.97e-08!86;UBERON:0000955!2.20e-07!69;UBERON:0006238!2.20e-07!69;UBERON:0001049!3.07e-07!57;UBERON:0005068!3.07e-07!57;UBERON:0006241!3.07e-07!57;UBERON:0007135!3.07e-07!57;UBERON:0000073!6.25e-07!94;UBERON:0001016!6.25e-07!94;UBERON:0002616!7.85e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.04e-15;32!UBERON:0002619;1.06e-14;22!UBERON:0001893;2.70e-14;34!UBERON:0002791;4.02e-14;32!UBERON:0001950;4.64e-14;20!UBERON:0003528;1.18e-13;34!UBERON:0002020;1.18e-13;34!UBERON:0000956;3.75e-13;25!UBERON:0000203;3.75e-13;25!UBERON:0002780;1.31e-09;41!UBERON:0001890;1.31e-09;41!UBERON:0000200;6.19e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.62e-17,32;UBERON:0001893,8.05e-16,34;UBERON:0002791,9.20e-16,32;UBERON:0002619,2.10e-15,22;UBERON:0003528,4.43e-15,34;UBERON:0002020,4.43e-15,34;UBERON:0001950,1.75e-14,20;UBERON:0000956,1.80e-13,25;UBERON:0000203,1.80e-13,25;UBERON:0002780,3.12e-13,41;UBERON:0001890,3.12e-13,41;UBERON:0003080,3.12e-13,41;UBERON:0006240,3.12e-13,41;UBERON:0000073,2.19e-10,53;UBERON:0002616,2.19e-10,53;UBERON:0001017,2.85e-10,81;UBERON:0000955,2.33e-09,68;UBERON:0006238,2.33e-09,68;UBERON:0001049,3.21e-09,56;UBERON:0005068,3.21e-09,56;UBERON:0006241,3.21e-09,56;UBERON:0007135,3.21e-09,56;UBERON:0001016,7.12e-09,89;UBERON:0004121,2.65e-08,171;UBERON:0000924,2.65e-08,171;UBERON:0006601,2.65e-08,171;UBERON:0003056,1.41e-07,61;UBERON:0010371,3.10e-07,104;UBERON:0000200,7.35e-07,6 | |||
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| |||
|short_description=p5@GSK3B | |||
}} |
Latest revision as of 21:27, 19 September 2015
Short description: | p5@GSK3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GSK3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -156bp_to_ENST00000264235, NM_001146156, NM_002093, uc003edn.2, uc003edo.2_5end |
EntrezGene: | GSK3B |
HGNC: | 4617 |
UniProt: | P49841Q6FI27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.62e-17 | 32 |
telencephalon | 8.05e-16 | 34 |
regional part of telencephalon | 9.20e-16 | 32 |
regional part of cerebral cortex | 2.10e-15 | 22 |
brain grey matter | 4.43e-15 | 34 |
gray matter | 4.43e-15 | 34 |
neocortex | 1.75e-14 | 20 |
cerebral cortex | 1.80e-13 | 25 |
pallium | 1.80e-13 | 25 |
regional part of forebrain | 3.12e-13 | 41 |
forebrain | 3.12e-13 | 41 |
anterior neural tube | 3.12e-13 | 41 |
future forebrain | 3.12e-13 | 41 |
regional part of nervous system | 2.19e-10 | 53 |
regional part of brain | 2.19e-10 | 53 |
central nervous system | 2.85e-10 | 81 |
brain | 2.33e-09 | 68 |
future brain | 2.33e-09 | 68 |
neural tube | 3.21e-09 | 56 |
neural rod | 3.21e-09 | 56 |
future spinal cord | 3.21e-09 | 56 |
neural keel | 3.21e-09 | 56 |
nervous system | 7.12e-09 | 89 |
ectoderm-derived structure | 2.65e-08 | 171 |
ectoderm | 2.65e-08 | 171 |
presumptive ectoderm | 2.65e-08 | 171 |
pre-chordal neural plate | 1.41e-07 | 61 |
ecto-epithelium | 3.10e-07 | 104 |
gyrus | 7.35e-07 | 6 |