FFCP PHASE1:Hg19::chr18:53253112..53253124,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6Y1 | |UniProt=B7Z6Y1 | ||
|association_with_transcript=211bp_to_ENST00000540999,uc010xdx.1_5end | |association_with_transcript=211bp_to_ENST00000540999,uc010xdx.1_5end | ||
|cluster_id=chr18:53253112..53253124,- | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_51_at_TCF4_5end | |description=CAGE_peak_51_at_TCF4_5end | ||
|id=chr18:53253112..53253124,- | |id=chr18:53253112..53253124,- | ||
|ontology_enrichment_celltype=CL:0000047!1.65e-10!8;CL:0000784!1.54e-08!3 | |ontology_enrichment_celltype=CL:0000047!1.65e-10!8;CL:0000784!1.54e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;5.53e-47;3!CL:0000451;2.39e-13;10!CL:0000047;6.93e-09;2!CL:0002253;6.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.53e-47,3;CL:0000451,2.39e-13,10;CL:0002253,7.49e-09,2;CL:0000047,1.78e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;1.93e-16;1!DOID:1357;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.41e-16,1;DOID:1357,1.41e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.96e-22!82;UBERON:0005743!5.90e-21!86;UBERON:0000073!6.11e-21!94;UBERON:0001016!6.11e-21!94;UBERON:0001893!2.13e-20!34;UBERON:0001869!7.03e-20!32;UBERON:0002791!7.98e-19!33;UBERON:0002020!3.31e-18!34;UBERON:0003528!3.31e-18!34;UBERON:0002780!9.64e-18!41;UBERON:0001890!9.64e-18!41;UBERON:0006240!9.64e-18!41;UBERON:0003080!3.43e-17!42;UBERON:0001049!9.62e-17!57;UBERON:0005068!9.62e-17!57;UBERON:0006241!9.62e-17!57;UBERON:0007135!9.62e-17!57;UBERON:0000955!2.92e-16!69;UBERON:0006238!2.92e-16!69;UBERON:0002619!3.25e-16!22;UBERON:0000956!3.35e-16!25;UBERON:0000203!3.35e-16!25;UBERON:0002616!5.96e-16!59;UBERON:0001950!2.51e-15!20;UBERON:0007023!8.45e-13!115;UBERON:0003075!7.32e-11!86;UBERON:0007284!7.32e-11!86;UBERON:0004121!2.65e-10!169;UBERON:0003056!3.53e-10!61;UBERON:0002346!4.43e-10!90;UBERON:0000924!7.75e-10!173;UBERON:0006601!7.75e-10!173;UBERON:0000153!9.24e-10!129;UBERON:0007811!9.24e-10!129;UBERON:0000200!1.46e-09!6;UBERON:0000033!3.89e-09!123;UBERON:0001871!3.50e-07!7 | |ontology_enrichment_uberon=UBERON:0001017!1.96e-22!82;UBERON:0005743!5.90e-21!86;UBERON:0000073!6.11e-21!94;UBERON:0001016!6.11e-21!94;UBERON:0001893!2.13e-20!34;UBERON:0001869!7.03e-20!32;UBERON:0002791!7.98e-19!33;UBERON:0002020!3.31e-18!34;UBERON:0003528!3.31e-18!34;UBERON:0002780!9.64e-18!41;UBERON:0001890!9.64e-18!41;UBERON:0006240!9.64e-18!41;UBERON:0003080!3.43e-17!42;UBERON:0001049!9.62e-17!57;UBERON:0005068!9.62e-17!57;UBERON:0006241!9.62e-17!57;UBERON:0007135!9.62e-17!57;UBERON:0000955!2.92e-16!69;UBERON:0006238!2.92e-16!69;UBERON:0002619!3.25e-16!22;UBERON:0000956!3.35e-16!25;UBERON:0000203!3.35e-16!25;UBERON:0002616!5.96e-16!59;UBERON:0001950!2.51e-15!20;UBERON:0007023!8.45e-13!115;UBERON:0003075!7.32e-11!86;UBERON:0007284!7.32e-11!86;UBERON:0004121!2.65e-10!169;UBERON:0003056!3.53e-10!61;UBERON:0002346!4.43e-10!90;UBERON:0000924!7.75e-10!173;UBERON:0006601!7.75e-10!173;UBERON:0000153!9.24e-10!129;UBERON:0007811!9.24e-10!129;UBERON:0000200!1.46e-09!6;UBERON:0000033!3.89e-09!123;UBERON:0001871!3.50e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.93e-16;1!UBERON:0001825;1.93e-16;1!UBERON:0001954;6.93e-09;2!UBERON:0003022;6.93e-09;2!UBERON:0002421;6.93e-09;2!UBERON:0002600;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.41e-16,1;UBERON:0001825,1.41e-16,1;UBERON:0001954,6.42e-09,2;UBERON:0003022,6.42e-09,2;UBERON:0002421,6.42e-09,2;UBERON:0002600,6.42e-09,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,5.72377498332821,6.29194401858141,2.22874500797739,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0.185803175125719,0.432807638929335,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.774054819518572,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.75465485467441,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0.458146384663663,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0.415440338029185,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,0,0,0,0.121792598380896,0,0,0,0,0,1.72759505875258,0.886068179966986,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.873677105536111,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,1.26035848110859,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,10.0522013014674,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.339957450954573,2.18175345170189,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,5.72377498332821,6.29194401858141,2.22874500797739,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0.185803175125719,0.432807638929335,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.774054819518572,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29833183845255,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,2.75465485467441,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264768380074501,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0.458146384663663,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0.415440338029185,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.533937062838473,0,0,0,0,0.121792598380896,0,0,0,0,0,1.72759505875258,0.886068179966986,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.873677105536111,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,1.26035848110859,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,10.0522013014674,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0.339957450954573,2.18175345170189,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p51@TCF4 | |short_description=p51@TCF4 | ||
}} | }} |
Latest revision as of 21:18, 19 September 2015
Short description: | p51@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_TCF4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 211bp_to_ENST00000540999, uc010xdx.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B7Z6Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.53e-47 | 3 |
dendritic cell | 2.39e-13 | 10 |
epithelial cell of large intestine | 7.49e-09 | 2 |
neuronal stem cell | 1.78e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.41e-16 | 1 |
paranasal sinus | 1.41e-16 | 1 |
Ammon's horn | 6.42e-09 | 2 |
lobe parts of cerebral cortex | 6.42e-09 | 2 |
hippocampal formation | 6.42e-09 | 2 |
limbic lobe | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.41e-16 | 1 |
maxillary sinus cancer | 1.41e-16 | 1 |