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FFCP PHASE1:Hg19::chr18:53252911..53252918,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6925
|EntrezGene=6925
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11634
|HGNC=11634
|TSSclassifier=strong
|UniProt=B7Z6Y1,G0LNU4
|UniProt=B7Z6Y1,G0LNU4
|association_with_transcript=-328bp_to_FR748214,FR748215_5end
|association_with_transcript=-328bp_to_FR748214,FR748215_5end
|cluster_id=chr18:53252911..53252918,-
|coexpression_cluster_id=C86
|description=CAGE_peak_106_at_TCF4_5end
|description=CAGE_peak_106_at_TCF4_5end
|id=chr18:53252911..53252918,-
|id=chr18:53252911..53252918,-
|ontology_enrichment_celltype=CL:0002253!2.15e-07!2;CL:0000047!7.66e-07!8
|ontology_enrichment_celltype=CL:0002253!2.15e-07!2;CL:0000047!7.66e-07!8
|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25
|ontology_enrichment_uberon=UBERON:0001950!1.98e-26!20;UBERON:0002619!4.32e-24!22;UBERON:0000956!2.97e-21!25;UBERON:0000203!2.97e-21!25;UBERON:0001869!1.24e-16!32;UBERON:0002791!3.96e-16!33;UBERON:0002020!1.19e-15!34;UBERON:0003528!1.19e-15!34;UBERON:0001893!1.19e-15!34;UBERON:0002702!1.82e-13!1;UBERON:0002581!4.77e-13!1;UBERON:0002780!5.99e-13!41;UBERON:0001890!5.99e-13!41;UBERON:0006240!5.99e-13!41;UBERON:0002902!7.68e-13!1;UBERON:0009899!7.68e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0003080!1.24e-12!42;UBERON:0001872!3.42e-10!5;UBERON:0001017!3.58e-10!82;UBERON:0005743!1.16e-09!86;UBERON:0001049!3.29e-09!57;UBERON:0005068!3.29e-09!57;UBERON:0006241!3.29e-09!57;UBERON:0007135!3.29e-09!57;UBERON:0002616!7.00e-09!59;UBERON:0000200!7.05e-09!6;UBERON:0000073!1.16e-08!94;UBERON:0001016!1.16e-08!94;UBERON:0003056!1.42e-08!61;UBERON:0000955!2.09e-07!69;UBERON:0006238!2.09e-07!69;UBERON:0001870!2.28e-07!2;UBERON:0001871!9.11e-07!7
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25
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|short_description=p106@TCF4
|short_description=p106@TCF4
}}
}}

Latest revision as of 21:15, 19 September 2015

Short description:p106@TCF4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_106_at_TCF4_5end
Coexpression cluster:C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma
Association with transcript: -328bp_to_FR748214, FR748215_5end
EntrezGene:TCF4
HGNC: 11634
UniProt: B7Z6Y1G0LNU4
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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