FFCP PHASE1:Hg19::chr17:37308231..37308252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:37308231..37308252,-
|short_description=p7@PLXDC1
|description=CAGE_peak_7_at_PLXDC1_5end
|association_with_transcript=-329bp_to_ENST00000394316,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57125 | |EntrezGene=57125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |HGNC=20945 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUK5 | |UniProt=Q8IUK5 | ||
|association_with_transcript=-329bp_to_ENST00000394316,ENST00000394318,NM_020405,uc002hrg.2,uc002hrh.2,uc002hri.2_5end | |||
|cluster_id=chr17:37308231..37308252,- | |||
|description=CAGE_peak_7_at_PLXDC1_5end | |||
|id=chr17:37308231..37308252,- | |||
|ontology_enrichment_celltype=CL:0000791!8.72e-17!18;CL:0000789!8.72e-17!18;CL:0002420!8.72e-17!18;CL:0002419!8.72e-17!18;CL:0000790!8.72e-17!18;CL:0000625!5.24e-14!11;CL:0000084!9.96e-12!25;CL:0000827!9.96e-12!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.65e-27;18!CL:0000789;2.65e-27;18!CL:0002419;2.65e-27;18!CL:0000084;5.14e-19;25!CL:0000625;1.07e-18;11!CL:0000624;5.55e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.23e-27,18;CL:0000789,2.23e-27,18;CL:0002420,2.23e-27,18;CL:0002419,2.23e-27,18;CL:0000790,2.23e-27,18;CL:0000084,4.55e-19,25;CL:0000827,4.55e-19,25;CL:0000625,7.14e-19,11;CL:0000624,7.03e-12,6;CL:0000838,5.17e-08,52;CL:0000542,8.03e-08,53;CL:0000051,8.03e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-27;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-45!115;UBERON:0001049!1.42e-15!57;UBERON:0005068!1.42e-15!57;UBERON:0006241!1.42e-15!57;UBERON:0007135!1.42e-15!57;UBERON:0002780!3.26e-15!41;UBERON:0001890!3.26e-15!41;UBERON:0006240!3.26e-15!41;UBERON:0003080!1.19e-14!42;UBERON:0001893!1.40e-13!34;UBERON:0002020!1.99e-13!34;UBERON:0003528!1.99e-13!34;UBERON:0002791!9.74e-13!33;UBERON:0002616!1.58e-12!59;UBERON:0001869!3.95e-12!32;UBERON:0002346!4.43e-12!90;UBERON:0000955!7.47e-12!69;UBERON:0006238!7.47e-12!69;UBERON:0003075!9.42e-12!86;UBERON:0007284!9.42e-12!86;UBERON:0001017!1.60e-11!82;UBERON:0005743!2.16e-11!86;UBERON:0002619!2.18e-11!22;UBERON:0001950!2.56e-11!20;UBERON:0000073!1.10e-10!94;UBERON:0001016!1.10e-10!94;UBERON:0000956!1.70e-09!25;UBERON:0000203!1.70e-09!25;UBERON:0003056!1.78e-09!61;UBERON:0000153!8.51e-09!129;UBERON:0007811!8.51e-09!129;UBERON:0000033!7.56e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.74e-10;2!UBERON:0002757;1.74e-10;2!UBERON:0010134;1.74e-10;2!UBERON:0005408;1.74e-10;2!UBERON:0001899;1.74e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.76e-10,2;UBERON:0002757,1.76e-10,2;UBERON:0010134,1.76e-10,2;UBERON:0005408,1.76e-10,2;UBERON:0001899,1.76e-10,2;UBERON:0007023,5.46e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0.895661896959697,1.29557466407592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.9506465517075,2.35806457649499,1.23360899399706,0,0,0.946895611469467,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0,0,4.89345658434799,5.61835738988397,4.18142095219907,0,1.14966148080576,1.37450978193052,1.01207876807801,1.27426165729639,1.30216690771284,3.8018081777935,0.752875595388864,0.76791966692651,2.49861453104692,1.89421801635213,0.821127996921047,1.20964045934839,0.267440195783507,2.31719046212478,0,0,0,0,0,0,1.5905718941022,0,0,0,0,1.0478326039817,0,0,0.97364218096405,0.174129737299267,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,1.44737618286021,0,0.853820462427555,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0,0.569647187174163,0,0.822724546172388,1.29694662238543,0.540031437238115,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.690503839458535,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,1.13959432720582,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.11712960508902,0.916641696046735,0.717873024576814,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0.533937062838473,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0.558867626472451,0,0,0,0,0,0,0,0,0,1.10961172300523,0,1.25783950876288,1.77962244319307,0,0.604923695052956,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,3.78554694685953,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.646948868380091,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.834979926253974,0,0.319267718114302,0.41023272848151,0.252071696221718,1.72893131160545,0.484426936895553,0,0,0,0,0,0,0,0.994581110581374,1.0529445968896,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.887821342714695,0.546974809018219,0,0.992422356778588,0,0,4.82131652290458,4.37168838884471,0,0,0.177404740325278,0.115233987555779,0,0.679697329768317,0.855046056317038,0,0,0.549451649953598,0.314231179832004,0,0,0,0,1.35805433935647,1.10609528212909,0,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0.237840181555137,0,0,0,0.463044948647668,0.218559560503957,0,0.735444965261716,0,0.196308467114945,0,2.113278637917,0.169927114687817,0.0939839179798536,0.193373663920732,0,0,0,0,0,1.83491713361816,0.716697915757256,0,1.15585533324555,0.436350690340377,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0.682008283964155,1.60778478093707,0,0.413731983447581,1.0661699095049,0.23806443146374,0.581300188524055,0.806971285846153,0,0.0636471582781649,0.202117188958219,0.217716747896961,1.71116650542641,0.875576689189638,0.286888821570705,0,0,0.106727345877715,0,0,0,1.1001729976458,0.406896178315738,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0.895661896959697,1.29557466407592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.9506465517075,2.35806457649499,1.23360899399706,0,0,0.946895611469467,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0,0,4.89345658434799,5.61835738988397,4.18142095219907,0,1.14966148080576,1.37450978193052,1.01207876807801,1.27426165729639,1.30216690771284,3.8018081777935,0.752875595388864,0.76791966692651,2.49861453104692,1.89421801635213,0.821127996921047,1.20964045934839,0.267440195783507,2.31719046212478,0,0,0,0,0,0,1.5905718941022,0,0,0,0,1.0478326039817,0,0,0.97364218096405,0.174129737299267,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.898401253958239,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,1.44737618286021,0,0.853820462427555,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,0,0.569647187174163,0,0.822724546172388,1.29694662238543,0.540031437238115,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.690503839458535,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,1.13959432720582,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.11712960508902,0.916641696046735,0.717873024576814,0.199679000498991,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0.533937062838473,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0.558867626472451,0,0,0,0,0,0,0,0,0,1.10961172300523,0,1.25783950876288,1.77962244319307,0,0.604923695052956,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,3.78554694685953,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.646948868380091,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.834979926253974,0,0.319267718114302,0.41023272848151,0.252071696221718,1.72893131160545,0.484426936895553,0,0,0,0,0,0,0,0.994581110581374,1.0529445968896,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.887821342714695,0.546974809018219,0,0.992422356778588,0,0,4.82131652290458,4.37168838884471,0,0,0.177404740325278,0.115233987555779,0,0.679697329768317,0.855046056317038,0,0,0.549451649953598,0.314231179832004,0,0,0,0,1.35805433935647,1.10609528212909,0,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0.237840181555137,0,0,0,0.463044948647668,0.218559560503957,0,0.735444965261716,0,0.196308467114945,0,2.113278637917,0.169927114687817,0.0939839179798536,0.193373663920732,0,0,0,0,0,1.83491713361816,0.716697915757256,0,1.15585533324555,0.436350690340377,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0.682008283964155,1.60778478093707,0,0.413731983447581,1.0661699095049,0.23806443146374,0.581300188524055,0.806971285846153,0,0.0636471582781649,0.202117188958219,0.217716747896961,1.71116650542641,0.875576689189638,0.286888821570705,0,0,0.106727345877715,0,0,0,1.1001729976458,0.406896178315738,0,2.01273793591026,0 | ||
|short_description=p7@PLXDC1 | |||
}} | }} |
Latest revision as of 21:12, 19 September 2015
Short description: | p7@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PLXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -329bp_to_ENST00000394316, ENST00000394318, NM_020405, uc002hrg.2, uc002hrh.2, uc002hri.2_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | Q8IUK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.23e-27 | 18 |
alpha-beta T cell | 2.23e-27 | 18 |
immature T cell | 2.23e-27 | 18 |
mature T cell | 2.23e-27 | 18 |
immature alpha-beta T cell | 2.23e-27 | 18 |
T cell | 4.55e-19 | 25 |
pro-T cell | 4.55e-19 | 25 |
CD8-positive, alpha-beta T cell | 7.14e-19 | 11 |
CD4-positive, alpha-beta T cell | 7.03e-12 | 6 |
lymphoid lineage restricted progenitor cell | 5.17e-08 | 52 |
lymphocyte | 8.03e-08 | 53 |
common lymphoid progenitor | 8.03e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.76e-10 | 2 |
regional part of epithalamus | 1.76e-10 | 2 |
secretory circumventricular organ | 1.76e-10 | 2 |
circumventricular organ | 1.76e-10 | 2 |
epithalamus | 1.76e-10 | 2 |
adult organism | 5.46e-08 | 114 |