FFCP PHASE1:Hg19::chr17:37308231..37308252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57125 | |EntrezGene=57125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |HGNC=20945 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUK5 | |UniProt=Q8IUK5 | ||
|association_with_transcript=-329bp_to_ENST00000394316,ENST00000394318,NM_020405,uc002hrg.2,uc002hrh.2,uc002hri.2_5end | |association_with_transcript=-329bp_to_ENST00000394316,ENST00000394318,NM_020405,uc002hrg.2,uc002hrh.2,uc002hri.2_5end | ||
|cluster_id=chr17:37308231..37308252,- | |||
|description=CAGE_peak_7_at_PLXDC1_5end | |description=CAGE_peak_7_at_PLXDC1_5end | ||
|id=chr17:37308231..37308252,- | |id=chr17:37308231..37308252,- | ||
|ontology_enrichment_celltype=CL:0000791!8.72e-17!18;CL:0000789!8.72e-17!18;CL:0002420!8.72e-17!18;CL:0002419!8.72e-17!18;CL:0000790!8.72e-17!18;CL:0000625!5.24e-14!11;CL:0000084!9.96e-12!25;CL:0000827!9.96e-12!25 | |ontology_enrichment_celltype=CL:0000791!8.72e-17!18;CL:0000789!8.72e-17!18;CL:0002420!8.72e-17!18;CL:0002419!8.72e-17!18;CL:0000790!8.72e-17!18;CL:0000625!5.24e-14!11;CL:0000084!9.96e-12!25;CL:0000827!9.96e-12!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.65e-27;18!CL:0000789;2.65e-27;18!CL:0002419;2.65e-27;18!CL:0000084;5.14e-19;25!CL:0000625;1.07e-18;11!CL:0000624;5.55e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.23e-27,18;CL:0000789,2.23e-27,18;CL:0002420,2.23e-27,18;CL:0002419,2.23e-27,18;CL:0000790,2.23e-27,18;CL:0000084,4.55e-19,25;CL:0000827,4.55e-19,25;CL:0000625,7.14e-19,11;CL:0000624,7.03e-12,6;CL:0000838,5.17e-08,52;CL:0000542,8.03e-08,53;CL:0000051,8.03e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.65e-27;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.75e-45!115;UBERON:0001049!1.42e-15!57;UBERON:0005068!1.42e-15!57;UBERON:0006241!1.42e-15!57;UBERON:0007135!1.42e-15!57;UBERON:0002780!3.26e-15!41;UBERON:0001890!3.26e-15!41;UBERON:0006240!3.26e-15!41;UBERON:0003080!1.19e-14!42;UBERON:0001893!1.40e-13!34;UBERON:0002020!1.99e-13!34;UBERON:0003528!1.99e-13!34;UBERON:0002791!9.74e-13!33;UBERON:0002616!1.58e-12!59;UBERON:0001869!3.95e-12!32;UBERON:0002346!4.43e-12!90;UBERON:0000955!7.47e-12!69;UBERON:0006238!7.47e-12!69;UBERON:0003075!9.42e-12!86;UBERON:0007284!9.42e-12!86;UBERON:0001017!1.60e-11!82;UBERON:0005743!2.16e-11!86;UBERON:0002619!2.18e-11!22;UBERON:0001950!2.56e-11!20;UBERON:0000073!1.10e-10!94;UBERON:0001016!1.10e-10!94;UBERON:0000956!1.70e-09!25;UBERON:0000203!1.70e-09!25;UBERON:0003056!1.78e-09!61;UBERON:0000153!8.51e-09!129;UBERON:0007811!8.51e-09!129;UBERON:0000033!7.56e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.74e-10;2!UBERON:0002757;1.74e-10;2!UBERON:0010134;1.74e-10;2!UBERON:0005408;1.74e-10;2!UBERON:0001899;1.74e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.76e-10,2;UBERON:0002757,1.76e-10,2;UBERON:0010134,1.76e-10,2;UBERON:0005408,1.76e-10,2;UBERON:0001899,1.76e-10,2;UBERON:0007023,5.46e-08,114 | |||
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| ||
|short_description=p7@PLXDC1 | |short_description=p7@PLXDC1 | ||
}} | }} |
Latest revision as of 21:12, 19 September 2015
Short description: | p7@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PLXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -329bp_to_ENST00000394316, ENST00000394318, NM_020405, uc002hrg.2, uc002hrh.2, uc002hri.2_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | Q8IUK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.23e-27 | 18 |
alpha-beta T cell | 2.23e-27 | 18 |
immature T cell | 2.23e-27 | 18 |
mature T cell | 2.23e-27 | 18 |
immature alpha-beta T cell | 2.23e-27 | 18 |
T cell | 4.55e-19 | 25 |
pro-T cell | 4.55e-19 | 25 |
CD8-positive, alpha-beta T cell | 7.14e-19 | 11 |
CD4-positive, alpha-beta T cell | 7.03e-12 | 6 |
lymphoid lineage restricted progenitor cell | 5.17e-08 | 52 |
lymphocyte | 8.03e-08 | 53 |
common lymphoid progenitor | 8.03e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.76e-10 | 2 |
regional part of epithalamus | 1.76e-10 | 2 |
secretory circumventricular organ | 1.76e-10 | 2 |
circumventricular organ | 1.76e-10 | 2 |
epithalamus | 1.76e-10 | 2 |
adult organism | 5.46e-08 | 114 |