FFCP PHASE1:Hg19::chr18:53089770..53089786,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=-47bp_to_NM_001243233,uc010xdw.1_5end | |association_with_transcript=-47bp_to_NM_001243233,uc010xdw.1_5end | ||
|cluster_id=chr18:53089770..53089786,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_65_at_TCF4_5end | |description=CAGE_peak_65_at_TCF4_5end | ||
|id=chr18:53089770..53089786,- | |id=chr18:53089770..53089786,- | ||
|ontology_enrichment_celltype=CL:0000047!1.22e-10!8;CL:0002319!4.37e-08!25 | |ontology_enrichment_celltype=CL:0000047!1.22e-10!8;CL:0002319!4.37e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000817;2.78e-26;1!CL:0000785;4.61e-26;1!CL:0000819;4.61e-26;1!CL:0000540;2.58e-17;6!CL:0000404;2.58e-17;6!CL:0000047;9.40e-14;2!CL:0000945;4.48e-10;24!CL:0002319;6.76e-09;25!CL:0000236;1.17e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,3.94e-34,3;CL:0000047,2.62e-28,8;CL:0000819,3.58e-26,1;CL:0000540,2.38e-17,6;CL:0000031,2.38e-17,6;CL:0000404,2.38e-17,6;CL:0000785,8.28e-14,2;CL:0000955,8.28e-14,2;CL:0000818,8.28e-14,2;CL:0000954,8.28e-14,2;CL:0000816,8.28e-14,2;CL:0000945,4.35e-10,24;CL:0000826,4.35e-10,24;CL:0002319,6.58e-09,25;CL:0000236,4.04e-08,14;CL:0000542,5.69e-08,53;CL:0000051,5.69e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000031;2.58e-17;6!CL:0000954;9.40e-14;2 | |||
|ontology_enrichment_disease=DOID:171!1.58e-10!10;DOID:169!2.04e-08!6 | |ontology_enrichment_disease=DOID:171!1.58e-10!10;DOID:169!2.04e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.61e-26;1!DOID:8675;4.61e-26;1!DOID:12603;4.61e-26;1!DOID:0060058;5.41e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.58e-26,1;DOID:8675,3.58e-26,1;DOID:12603,5.93e-26,1;DOID:0060058,5.15e-11,10;DOID:2531,2.86e-08,51;DOID:0060083,2.86e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.38e-16!94;UBERON:0001016!4.38e-16!94;UBERON:0001950!2.10e-12!20;UBERON:0001017!3.80e-12!82;UBERON:0000956!8.65e-12!25;UBERON:0000203!8.65e-12!25;UBERON:0005743!2.38e-11!86;UBERON:0002619!3.75e-11!22;UBERON:0002791!4.14e-10!33;UBERON:0000013!4.27e-10!5;UBERON:0002410!4.27e-10!5;UBERON:0001893!9.51e-10!34;UBERON:0001872!9.62e-10!5;UBERON:0000924!9.84e-10!173;UBERON:0006601!9.84e-10!173;UBERON:0001869!8.28e-09!32;UBERON:0004121!1.79e-08!169;UBERON:0000010!2.91e-08!8;UBERON:0002020!3.53e-08!34;UBERON:0003528!3.53e-08!34;UBERON:0001049!3.94e-08!57;UBERON:0005068!3.94e-08!57;UBERON:0006241!3.94e-08!57;UBERON:0007135!3.94e-08!57;UBERON:0002780!1.04e-07!41;UBERON:0001890!1.04e-07!41;UBERON:0006240!1.04e-07!41;UBERON:0003080!1.79e-07!42;UBERON:0000955!4.92e-07!69;UBERON:0006238!4.92e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22963810150862,4.03953796334046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,2.91927662745066,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,7.55114109961555,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0.109209638192014,0,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0,0.79062257427272,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22963810150862,4.03953796334046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,2.91927662745066,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,7.55114109961555,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0.157265941855896,0.109209638192014,0,0,0.247871528518004,0.558644917973244,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.994753875806841,0,0.79062257427272,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p65@TCF4 | |short_description=p65@TCF4 | ||
}} | }} |
Latest revision as of 21:06, 19 September 2015
Short description: | p65@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_65_at_TCF4_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -47bp_to_NM_001243233, uc010xdw.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 3.94e-34 | 3 |
neuronal stem cell | 2.62e-28 | 8 |
B-1 B cell | 3.58e-26 | 1 |
neuron | 2.38e-17 | 6 |
neuroblast | 2.38e-17 | 6 |
electrically signaling cell | 2.38e-17 | 6 |
mature B cell | 8.28e-14 | 2 |
pre-B-II cell | 8.28e-14 | 2 |
transitional stage B cell | 8.28e-14 | 2 |
small pre-B-II cell | 8.28e-14 | 2 |
immature B cell | 8.28e-14 | 2 |
lymphocyte of B lineage | 4.35e-10 | 24 |
pro-B cell | 4.35e-10 | 24 |
neural cell | 6.58e-09 | 25 |
B cell | 4.04e-08 | 14 |
lymphocyte | 5.69e-08 | 53 |
common lymphoid progenitor | 5.69e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.58e-26 | 1 |
lymphosarcoma | 3.58e-26 | 1 |
acute leukemia | 5.93e-26 | 1 |
lymphoma | 5.15e-11 | 10 |
hematologic cancer | 2.86e-08 | 51 |
immune system cancer | 2.86e-08 | 51 |