FFCP PHASE1:Hg19::chr14:35872962..35873025,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:35872962..35873025,-
|short_description=p3@NFKBIA
|description=CAGE_peak_3_at_NFKBIA_5end
|association_with_transcript=320bp_to_ENST00000557389,uc001wte.3...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4792 | |EntrezGene=4792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7797 | |HGNC=7797 | ||
|TSSclassifier=strong | |||
|UniProt=G3V286 | |UniProt=G3V286 | ||
|association_with_transcript=320bp_to_ENST00000557389,uc001wte.3_5end | |||
|cluster_id=chr14:35872962..35873025,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_NFKBIA_5end | |||
|id=chr14:35872962..35873025,- | |||
|ontology_enrichment_celltype=CL:0000766!2.01e-29!76;CL:0002057!4.75e-26!42;CL:0000860!7.88e-26!45;CL:0000738!1.85e-24!140;CL:0000557!3.29e-24!71;CL:0002009!7.56e-24!65;CL:0002194!1.09e-22!63;CL:0000576!1.09e-22!63;CL:0000040!1.09e-22!63;CL:0000559!1.09e-22!63;CL:0000839!1.41e-22!70;CL:0002031!2.71e-18!124;CL:0002087!3.26e-18!119;CL:0000037!2.08e-10!172;CL:0000566!2.08e-10!172;CL:0000988!2.36e-10!182;CL:0000763!1.08e-09!112;CL:0000049!1.08e-09!112;CL:0002032!3.19e-09!165;CL:0000837!3.19e-09!165;CL:0000094!7.39e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-20;33!CL:0002057;1.73e-20;33!CL:0000473;3.93e-18;39!CL:0000234;3.93e-18;39!CL:0000576;4.99e-16;48!CL:0000766;5.62e-15;69!CL:0000094;2.86e-07;8!CL:0002087;6.29e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.73e-32,72;CL:0000473,4.48e-29,48;CL:0000234,4.48e-29,48;CL:0000860,1.13e-27,42;CL:0002057,1.13e-27,42;CL:0000557,2.33e-26,67;CL:0000738,3.49e-26,136;CL:0002009,8.28e-26,61;CL:0002194,1.47e-24,59;CL:0000576,1.47e-24,59;CL:0000040,1.47e-24,59;CL:0000559,1.47e-24,59;CL:0000839,3.42e-24,66;CL:0002087,1.35e-19,115;CL:0002031,1.44e-19,120;CL:0000988,7.80e-13,177;CL:0000037,1.09e-12,168;CL:0000763,7.59e-12,108;CL:0000049,7.59e-12,108;CL:0002032,3.27e-11,161;CL:0000837,3.27e-11,161;CL:0000094,3.29e-07,8;CL:0002393,7.79e-07,9;CL:0002397,7.79e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.67e-21!115;UBERON:0002193!4.36e-21!112;UBERON:0002371!2.14e-20!80;UBERON:0002390!2.69e-20!102;UBERON:0003061!2.69e-20!102;UBERON:0003081!8.62e-17!216;UBERON:0001474!1.99e-16!86;UBERON:0004765!2.80e-13!101;UBERON:0001434!2.80e-13!101;UBERON:0000926!2.94e-11!448;UBERON:0004120!2.94e-11!448;UBERON:0006603!2.94e-11!448;UBERON:0002204!6.31e-09!167;UBERON:0000923!3.38e-08!604;UBERON:0005291!3.38e-08!604;UBERON:0006598!3.38e-08!604;UBERON:0002532!3.38e-08!604;UBERON:0002050!3.50e-08!605;UBERON:0005423!3.50e-08!605;UBERON:0000922!2.34e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.24e-22,108;UBERON:0002371,5.20e-22,76;UBERON:0002405,6.12e-22,93;UBERON:0002390,1.32e-21,98;UBERON:0003061,1.32e-21,98;UBERON:0001474,8.43e-18,82;UBERON:0004765,6.06e-17,90;UBERON:0003081,1.30e-14,203;UBERON:0001434,1.35e-13,100;UBERON:0002204,3.10e-08,167 | |||
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| ||
|short_description=p3@NFKBIA | |||
}} | }} |
Latest revision as of 21:05, 19 September 2015
Short description: | p3@NFKBIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NFKBIA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 320bp_to_ENST00000557389, uc001wte.3_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | G3V286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.73e-32 | 72 |
defensive cell | 4.48e-29 | 48 |
phagocyte | 4.48e-29 | 48 |
classical monocyte | 1.13e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-27 | 42 |
granulocyte monocyte progenitor cell | 2.33e-26 | 67 |
leukocyte | 3.49e-26 | 136 |
macrophage dendritic cell progenitor | 8.28e-26 | 61 |
monopoietic cell | 1.47e-24 | 59 |
monocyte | 1.47e-24 | 59 |
monoblast | 1.47e-24 | 59 |
promonocyte | 1.47e-24 | 59 |
myeloid lineage restricted progenitor cell | 3.42e-24 | 66 |
nongranular leukocyte | 1.35e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.44e-19 | 120 |
hematopoietic cell | 7.80e-13 | 177 |
hematopoietic stem cell | 1.09e-12 | 168 |
myeloid cell | 7.59e-12 | 108 |
common myeloid progenitor | 7.59e-12 | 108 |
hematopoietic oligopotent progenitor cell | 3.27e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.27e-11 | 161 |
granulocyte | 3.29e-07 | 8 |
intermediate monocyte | 7.79e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.24e-22 | 108 |
bone marrow | 5.20e-22 | 76 |
immune system | 6.12e-22 | 93 |
hematopoietic system | 1.32e-21 | 98 |
blood island | 1.32e-21 | 98 |
bone element | 8.43e-18 | 82 |
skeletal element | 6.06e-17 | 90 |
lateral plate mesoderm | 1.30e-14 | 203 |
skeletal system | 1.35e-13 | 100 |
musculoskeletal system | 3.10e-08 | 167 |