FFCP PHASE1:Hg19::chr18:53069389..53069416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_uc010xdv.1_5end | |association_with_transcript=20bp_to_uc010xdv.1_5end | ||
|cluster_id=chr18:53069389..53069416,- | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_40_at_TCF4_5end | |description=CAGE_peak_40_at_TCF4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.08e-13;6!CL:0000404;4.08e-13;6 | |ontology_enrichment_celltype_v019=CL:0000540;4.08e-13;6!CL:0000404;4.08e-13;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.89e-17,8;CL:0000540,4.09e-13,6;CL:0000031,4.09e-13,6;CL:0000404,4.09e-13,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.08e-13;6!UBERON:0005425;3.39e-09;1 | |ontology_enrichment_development_v019=CL:0000031;4.08e-13;6!UBERON:0005425;3.39e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;7.08e-18;20!UBERON:0001869;8.47e-17;32!UBERON:0002619;2.94e-16;22!UBERON:0001872;5.90e-15;5!UBERON:0001893;1.36e-14;34!UBERON:0000956;2.69e-14;25!UBERON:0000203;2.69e-14;25!UBERON:0003528;2.96e-13;34!UBERON:0002020;2.96e-13;34!UBERON:0002791;3.71e-13;32!UBERON:0001016;1.91e-11;83!UBERON:0002780;7.72e-11;41!UBERON:0001890;7.72e-11;41!UBERON:0001882;3.39e-09;1!UBERON:0002022;3.39e-09;1!UBERON:0000941;3.39e-09;1!UBERON:0001785;3.39e-09;1!UBERON:0002464;3.39e-09;1!UBERON:0004904;3.39e-09;1!UBERON:0001021;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0005403;3.39e-09;1!UBERON:0000073;6.10e-09;53!UBERON:0002616;6.10e-09;53!UBERON:0001017;1.16e-07;75!UBERON:0000955;1.29e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0001950;7.08e-18;20!UBERON:0001869;8.47e-17;32!UBERON:0002619;2.94e-16;22!UBERON:0001872;5.90e-15;5!UBERON:0001893;1.36e-14;34!UBERON:0000956;2.69e-14;25!UBERON:0000203;2.69e-14;25!UBERON:0003528;2.96e-13;34!UBERON:0002020;2.96e-13;34!UBERON:0002791;3.71e-13;32!UBERON:0001016;1.91e-11;83!UBERON:0002780;7.72e-11;41!UBERON:0001890;7.72e-11;41!UBERON:0001882;3.39e-09;1!UBERON:0002022;3.39e-09;1!UBERON:0000941;3.39e-09;1!UBERON:0001785;3.39e-09;1!UBERON:0002464;3.39e-09;1!UBERON:0004904;3.39e-09;1!UBERON:0001021;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0005403;3.39e-09;1!UBERON:0000073;6.10e-09;53!UBERON:0002616;6.10e-09;53!UBERON:0001017;1.16e-07;75!UBERON:0000955;1.29e-07;68 | ||
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| ||
|short_description=p40@TCF4 | |short_description=p40@TCF4 | ||
}} | }} |
Latest revision as of 20:58, 19 September 2015
Short description: | p40@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_TCF4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 20bp_to_uc010xdv.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.89e-17 | 8 |
neuron | 4.09e-13 | 6 |
neuroblast | 4.09e-13 | 6 |
electrically signaling cell | 4.09e-13 | 6 |