FFCP PHASE1:Hg19::chr1:93297586..93297609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6125 | |EntrezGene=6125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10360 | |HGNC=10360 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTM6,A2RUM7,P46777 | |UniProt=B3KTM6,A2RUM7,P46777 | ||
|association_with_transcript=0bp_to_ENST00000432788,NM_000969,uc001doz.2,uc001dpa.2_5end | |association_with_transcript=0bp_to_ENST00000432788,NM_000969,uc001doz.2,uc001dpa.2_5end | ||
|cluster_id=chr1:93297586..93297609,+ | |||
|coexpression_cluster_id=C4009 | |||
|description=CAGE_peak_1_at_RPL5_5end | |description=CAGE_peak_1_at_RPL5_5end | ||
|id=chr1:93297586..93297609,+ | |id=chr1:93297586..93297609,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.38e-19!53;CL:0000051!1.38e-19!53;CL:0000838!3.50e-19!52;CL:0002087!3.29e-12!119;CL:0000037!1.04e-11!172;CL:0000566!1.04e-11!172;CL:0002031!4.25e-11!124;CL:0000945!1.41e-10!24;CL:0000826!1.41e-10!24;CL:0002032!1.81e-10!165;CL:0000837!1.81e-10!165;CL:0000988!2.45e-10!182;CL:0000084!6.66e-10!25;CL:0000827!6.66e-10!25;CL:0000738!9.68e-10!140;CL:0000791!1.24e-09!18;CL:0000789!1.24e-09!18;CL:0002420!1.24e-09!18;CL:0002419!1.24e-09!18;CL:0000790!1.24e-09!18;CL:0000625!4.31e-07!11;CL:0000236!7.56e-07!14 | |ontology_enrichment_celltype=CL:0000542!1.38e-19!53;CL:0000051!1.38e-19!53;CL:0000838!3.50e-19!52;CL:0002087!3.29e-12!119;CL:0000037!1.04e-11!172;CL:0000566!1.04e-11!172;CL:0002031!4.25e-11!124;CL:0000945!1.41e-10!24;CL:0000826!1.41e-10!24;CL:0002032!1.81e-10!165;CL:0000837!1.81e-10!165;CL:0000988!2.45e-10!182;CL:0000084!6.66e-10!25;CL:0000827!6.66e-10!25;CL:0000738!9.68e-10!140;CL:0000791!1.24e-09!18;CL:0000789!1.24e-09!18;CL:0002420!1.24e-09!18;CL:0002419!1.24e-09!18;CL:0000790!1.24e-09!18;CL:0000625!4.31e-07!11;CL:0000236!7.56e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;8.65e-12;53!CL:0000945;1.40e-10;24!CL:0000084;6.69e-10;25!CL:0000791;1.24e-09;18!CL:0000789;1.24e-09;18!CL:0002419;1.24e-09;18!CL:0000625;4.31e-07;11!CL:0000236;7.76e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.38e-19,53;CL:0000051,1.38e-19,53;CL:0000838,3.50e-19,52;CL:0002087,2.42e-12,115;CL:0000037,9.62e-12,168;CL:0002031,3.38e-11,120;CL:0000988,1.13e-10,177;CL:0000945,1.41e-10,24;CL:0000826,1.41e-10,24;CL:0002032,1.69e-10,161;CL:0000837,1.69e-10,161;CL:0000084,6.66e-10,25;CL:0000827,6.66e-10,25;CL:0000738,8.63e-10,136;CL:0000791,1.24e-09,18;CL:0000789,1.24e-09,18;CL:0002420,1.24e-09,18;CL:0002419,1.24e-09,18;CL:0000790,1.24e-09,18;CL:0000625,4.31e-07,11;CL:0000236,7.56e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;8.65e-12;53!CL:0000790;1.24e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!3.29e-07!51;DOID:0060083!3.29e-07!51 | |ontology_enrichment_disease=DOID:2531!3.29e-07!51;DOID:0060083!3.29e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.29e-07,51;DOID:0060083,3.29e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPL5 | |short_description=p1@RPL5 | ||
}} | }} |
Latest revision as of 20:55, 19 September 2015
Short description: | p1@RPL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL5_5end |
Coexpression cluster: | C4009_CD4_CD133_CD8_CD19_choriocarcinoma_Retinal_CD34 |
Association with transcript: | 0bp_to_ENST00000432788, NM_000969, uc001doz.2, uc001dpa.2_5end |
EntrezGene: | RPL5 |
HGNC: | 10360 |
UniProt: | B3KTM6A2RUM7P46777 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.38e-19 | 53 |
common lymphoid progenitor | 1.38e-19 | 53 |
lymphoid lineage restricted progenitor cell | 3.50e-19 | 52 |
nongranular leukocyte | 2.42e-12 | 115 |
hematopoietic stem cell | 9.62e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 3.38e-11 | 120 |
hematopoietic cell | 1.13e-10 | 177 |
lymphocyte of B lineage | 1.41e-10 | 24 |
pro-B cell | 1.41e-10 | 24 |
hematopoietic oligopotent progenitor cell | 1.69e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-10 | 161 |
T cell | 6.66e-10 | 25 |
pro-T cell | 6.66e-10 | 25 |
leukocyte | 8.63e-10 | 136 |
mature alpha-beta T cell | 1.24e-09 | 18 |
alpha-beta T cell | 1.24e-09 | 18 |
immature T cell | 1.24e-09 | 18 |
mature T cell | 1.24e-09 | 18 |
immature alpha-beta T cell | 1.24e-09 | 18 |
CD8-positive, alpha-beta T cell | 4.31e-07 | 11 |
B cell | 7.56e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.29e-07 | 51 |
immune system cancer | 3.29e-07 | 51 |