FFCP PHASE1:Hg19::chr1:93250703..93250734,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7813 | |EntrezGene=7813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3501 | |HGNC=3501 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000474806_5end | |association_with_transcript=-40bp_to_ENST00000474806_5end | ||
|cluster_id=chr1:93250703..93250734,- | |||
|description=CAGE_peak_3_at_EVI5_5end | |description=CAGE_peak_3_at_EVI5_5end | ||
|id=chr1:93250703..93250734,- | |id=chr1:93250703..93250734,- | ||
|ontology_enrichment_celltype=CL:0000576;3.74e-08;48!CL:0000860;1.01e-07;33!CL:0002057;1.01e-07;33!CL:0000473;6.05e-07;39!CL:0000234;6.05e-07;39 | |ontology_enrichment_celltype=CL:0002009!1.45e-13!65;CL:0000557!4.46e-13!71;CL:0002057!5.44e-13!42;CL:0002194!1.30e-12!63;CL:0000576!1.30e-12!63;CL:0000040!1.30e-12!63;CL:0000559!1.30e-12!63;CL:0000839!2.21e-12!70;CL:0000766!4.70e-12!76;CL:0000860!7.73e-12!45;CL:0000763!1.34e-08!112;CL:0000049!1.34e-08!112 | ||
| | |ontology_enrichment_celltype_v019=CL:0000576;3.74e-08;48!CL:0000860;1.01e-07;33!CL:0002057;1.01e-07;33!CL:0000473;6.05e-07;39!CL:0000234;6.05e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.76e-15,61;CL:0000557,1.02e-14,67;CL:0002194,3.63e-14,59;CL:0000576,3.63e-14,59;CL:0000040,3.63e-14,59;CL:0000559,3.63e-14,59;CL:0000860,6.50e-14,42;CL:0002057,6.50e-14,42;CL:0000839,6.68e-14,66;CL:0000766,1.36e-13,72;CL:0000473,3.89e-13,48;CL:0000234,3.89e-13,48;CL:0000763,1.99e-09,108;CL:0000049,1.99e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000923!3.00e-11!604;UBERON:0005291!3.00e-11!604;UBERON:0006598!3.00e-11!604;UBERON:0002532!3.00e-11!604;UBERON:0002050!4.47e-11!605;UBERON:0005423!4.47e-11!605;UBERON:0000922!1.05e-10!612;UBERON:0000062!1.01e-09!511;UBERON:0002204!1.11e-09!167;UBERON:0000468!1.24e-09!659;UBERON:0001474!2.36e-09!86;UBERON:0002371!3.96e-09!80;UBERON:0003081!4.32e-09!216;UBERON:0000467!5.27e-09!625;UBERON:0000480!6.53e-09!626;UBERON:0004765!1.31e-08!101;UBERON:0001434!1.31e-08!101;UBERON:0000948!6.55e-07!24;UBERON:0005498!6.55e-07!24;UBERON:0004140!6.55e-07!24;UBERON:0009881!6.55e-07!24;UBERON:0004141!6.55e-07!24;UBERON:0003084!6.55e-07!24;UBERON:0007005!6.55e-07!24;UBERON:0004139!6.55e-07!24;UBERON:0004291!6.55e-07!24 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000923,2.05e-11,560;UBERON:0010316,2.05e-11,560;UBERON:0005291,2.05e-11,560;UBERON:0006598,2.05e-11,560;UBERON:0010317,2.05e-11,560;UBERON:0002532,2.05e-11,560;UBERON:0002050,2.30e-11,564;UBERON:0003081,3.99e-11,203;UBERON:0005423,5.80e-11,581;UBERON:0002371,1.79e-10,76;UBERON:0001474,1.80e-10,82;UBERON:0000922,1.12e-09,592;UBERON:0002204,1.25e-09,167;UBERON:0001434,8.50e-09,100;UBERON:0000926,8.82e-09,315;UBERON:0004120,8.82e-09,315;UBERON:0006603,8.82e-09,315;UBERON:0004765,1.28e-08,90 | |||
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| ||
|short_description=p3@EVI5 | |short_description=p3@EVI5 | ||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p3@EVI5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EVI5_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000474806_5end |
EntrezGene: | EVI5 |
HGNC: | 3501 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.76e-15 | 61 |
granulocyte monocyte progenitor cell | 1.02e-14 | 67 |
monopoietic cell | 3.63e-14 | 59 |
monocyte | 3.63e-14 | 59 |
monoblast | 3.63e-14 | 59 |
promonocyte | 3.63e-14 | 59 |
classical monocyte | 6.50e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.50e-14 | 42 |
myeloid lineage restricted progenitor cell | 6.68e-14 | 66 |
myeloid leukocyte | 1.36e-13 | 72 |
defensive cell | 3.89e-13 | 48 |
phagocyte | 3.89e-13 | 48 |
myeloid cell | 1.99e-09 | 108 |
common myeloid progenitor | 1.99e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
germ layer | 2.05e-11 | 560 |
germ layer / neural crest | 2.05e-11 | 560 |
embryonic tissue | 2.05e-11 | 560 |
presumptive structure | 2.05e-11 | 560 |
germ layer / neural crest derived structure | 2.05e-11 | 560 |
epiblast (generic) | 2.05e-11 | 560 |
embryonic structure | 2.30e-11 | 564 |
lateral plate mesoderm | 3.99e-11 | 203 |
developing anatomical structure | 5.80e-11 | 581 |
bone marrow | 1.79e-10 | 76 |
bone element | 1.80e-10 | 82 |
embryo | 1.12e-09 | 592 |
musculoskeletal system | 1.25e-09 | 167 |
skeletal system | 8.50e-09 | 100 |
mesoderm | 8.82e-09 | 315 |
mesoderm-derived structure | 8.82e-09 | 315 |
presumptive mesoderm | 8.82e-09 | 315 |
skeletal element | 1.28e-08 | 90 |