FFCP PHASE1:Hg19::chr10:90751021..90751032,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90751021..90751032,- to FFCP PHASE1:Hg19::chr10:90751021..90751032,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59 | |EntrezGene=59 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |HGNC=130 | ||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |UniProt=F6UVQ4 | ||
|association_with_transcript=12bp_to_ENST00000458159_5end | |||
|cluster_id=chr10:90751021..90751032,- | |||
|description=CAGE_peak_11_at_ACTA2_5end | |||
|id=chr10:90751021..90751032,- | |||
|ontology_enrichment_celltype=CL:0000055!4.89e-20!180;CL:0000183!1.02e-17!59;CL:0000187!2.01e-16!54;CL:0000680!3.15e-16!57;CL:0000056!3.15e-16!57;CL:0000355!3.15e-16!57;CL:0000393!6.87e-15!60;CL:0000211!6.87e-15!60;CL:0000192!5.28e-13!42;CL:0000514!5.28e-13!42;CL:0000359!7.76e-10!32;CL:0002371!8.49e-09!591;CL:0000057!1.08e-08!75;CL:0000220!1.98e-08!246;CL:0000144!3.66e-08!625;CL:0002321!3.97e-08!248;CL:0000222!6.69e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002598;1.69e-08;2!CL:0000244;2.16e-08;4!CL:0000731;2.16e-08;4!CL:0002539;3.81e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.38e-12,55;CL:0000680,1.63e-11,58;CL:0000056,1.63e-11,58;CL:0000355,1.63e-11,58;CL:0000393,9.24e-11,61;CL:0000211,9.24e-11,61;CL:0000192,4.20e-09,43;CL:0000514,4.20e-09,43;CL:0000244,7.51e-09,4;CL:0000731,7.51e-09,4;CL:0002598,1.71e-08,2;CL:0002539,2.87e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000355;4.03e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.71e-16!82;UBERON:0000914!1.34e-14!83;UBERON:0002329!1.34e-14!83;UBERON:0003077!1.34e-14!83;UBERON:0003059!1.34e-14!83;UBERON:0007282!1.34e-14!83;UBERON:0009618!1.34e-14!83;UBERON:0007285!1.34e-14!83;UBERON:0001134!5.10e-14!61;UBERON:0002036!5.10e-14!61;UBERON:0003082!5.10e-14!61;UBERON:0004290!5.22e-14!70;UBERON:0002385!1.41e-13!63;UBERON:0001015!1.41e-13!63;UBERON:0000383!1.41e-13!63;UBERON:0005256!1.64e-11!143;UBERON:0000475!1.54e-10!365;UBERON:0002100!1.76e-09!216;UBERON:0003102!3.45e-09!95;UBERON:0001637!1.59e-08!42;UBERON:0003509!1.59e-08!42;UBERON:0004572!1.59e-08!42;UBERON:0000490!7.24e-08!138;UBERON:0001135!3.69e-07!15;UBERON:0004872!7.84e-07!84;UBERON:0004573!8.36e-07!33;UBERON:0004571!8.36e-07!33;UBERON:0003104!9.05e-07!238;UBERON:0009142!9.05e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.81e-08;10!UBERON:0004695;3.81e-08;10!UBERON:0002111;3.81e-08;10!UBERON:0004178;3.81e-08;10!UBERON:0000365;8.72e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,7.94e-12,83;UBERON:0007503,2.99e-11,78;UBERON:0001134,1.58e-10,62;UBERON:0002036,1.58e-10,62;UBERON:0003082,1.58e-10,62;UBERON:0002385,4.42e-10,64;UBERON:0001015,4.42e-10,64;UBERON:0000383,4.42e-10,64;UBERON:0002329,5.27e-10,71;UBERON:0003059,5.27e-10,71;UBERON:0007282,5.27e-10,71;UBERON:0004290,5.27e-10,71;UBERON:0009618,5.27e-10,71;UBERON:0003077,8.24e-10,72;UBERON:0007285,8.24e-10,72;UBERON:0007524,1.27e-09,73;UBERON:0004237,2.87e-08,10;UBERON:0004695,2.87e-08,10;UBERON:0002111,2.87e-08,10;UBERON:0004178,2.87e-08,10;UBERON:0005256,3.43e-08,122;UBERON:0000365,3.79e-07,5 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.563817616383885,0,0.893922188854576,0.872338524100369,0,1.26343974685366,1.30592814099919,0.245733936501509,1.39560233594486,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,1.95173119516203,0.492484232307152,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,4.87613732627923,1.34140171940727,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.702678285545008,0.130979075497713,1.45718115317017,0.741568885568859,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,0,0.208994966536811,0,1.06729878806013,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.808264032418128,0.326923806226917,0.454072282934794,0,0.70296429550139,0.936480230490962,0,0.896692083310806,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0,0,0.741800787835671,0,1.43723628363248,0.168336113954066,0,0.554128230968366,0.438977620880838,0.612975591598039,0.300476117813194,0.340296549480063,0.179389635688862,1.49490172172997,0.635795703478686,0.600182192168805,0.412210116953756,0.515281080091258,0.558350568994769,0,0.0974370051611986,0.252433774244115,0.276149695926898,1.13152239773168,0.355009592516614,0.302256294682921,0.339121184620975,0,0.545492241181669,0.860413786167011,0,0,0,0.414644220061482,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0.219500570817251,2.24803506515239,0.201057944823262,0.740707561268237,0.651616610620649,1.03993478527958,0,0.231860809950154,1.29149563659404,0,0,0,0,0,0,0,0,0,0.335964256397719,1.70130116690864,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0.857479297891735,0.112131084345361,0,0,0.517086863031111,3.57656445851882,0,1.06375246633948,1.04007436911366,0.514414748524284,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0.710783897485092,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0.414415513436035,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0,0.234282829985426,0.902838299183157,4.5481500811197,0,0,0.184369168541703,1.73767228936166,0.391602314925481,0.686286847621712,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0.280660094433074,0.256278298511402,0,0.321707842287215,0,0,1.24293207719189,0.410635780069046,1.03850885836724,0.348631135379878,0,0.200506470303285,0.0920809889358963,0,0.910455840033585,2.75361271414791,0,0.231046011313244,0,0,0.316654886678627,0,0,0,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0.769350375349168,0,0.650756789328606,0.309123034943167,0,0,1.14853107599234,0,0,1.64340221096607,0.154048617114644,0.307007349452259,0,0.429680979473094,0.580066775656914,0.426133137080504,1.06838442776085,0.661139661443912,0.384380134730212,0.510450849978337,0.4046311234222,1.39453664789186,0.62962469366128,0,1.23213432070436,0.532306030317022,0.869932992075073,0.37064843820784,0,0,0.632758849437452,0.38126038784765,2.303080121802,2.56763392820352,0.636406495851874,0.78494864019923,0.539617372749944,0.823611089208164,0.824686816419805,1.2130948894399,0,2.52755073743389,0,0.243713489631284,0,0.272999822815972,2.12108147930569,0,0.551365343546124,1.32687795048244,0,4.05142873986681,0.655894752046633,0.811641507850816,0.92947049429925,0.281695602532241,0.717056761020258,0.392996164052485,0.7133421029625,0,0.633322905892992,0.658589785919804,0.75894634753143,0,0.384888450902048,0,0,0,2.58303223602738,1.68471475667626,0,1.83778720165568,0.507447609232169,0,0,0,0,0,0,0,0.320472213382419,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.492339221844278,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,2.34771483998355,1.56632924258183,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,1.05226393590145,0.829505531177977,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,1.0319161948297,0,0.146178634172371,0,0,0,0.225980740780532,0.274083849293502,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0,0,0,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| ||
|short_description=p11@ACTA2 | |||
}} | }} |
Latest revision as of 20:51, 19 September 2015
Short description: | p11@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ACTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.38e-12 | 55 |
muscle precursor cell | 1.63e-11 | 58 |
myoblast | 1.63e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-11 | 58 |
electrically responsive cell | 9.24e-11 | 61 |
electrically active cell | 9.24e-11 | 61 |
smooth muscle cell | 4.20e-09 | 43 |
smooth muscle myoblast | 4.20e-09 | 43 |
transitional epithelial cell | 7.51e-09 | 4 |
urothelial cell | 7.51e-09 | 4 |
bronchial smooth muscle cell | 1.71e-08 | 2 |
aortic smooth muscle cell | 2.87e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 7.94e-12 | 83 |
epithelial vesicle | 2.99e-11 | 78 |
skeletal muscle tissue | 1.58e-10 | 62 |
striated muscle tissue | 1.58e-10 | 62 |
myotome | 1.58e-10 | 62 |
muscle tissue | 4.42e-10 | 64 |
musculature | 4.42e-10 | 64 |
musculature of body | 4.42e-10 | 64 |
somite | 5.27e-10 | 71 |
presomitic mesoderm | 5.27e-10 | 71 |
presumptive segmental plate | 5.27e-10 | 71 |
dermomyotome | 5.27e-10 | 71 |
trunk paraxial mesoderm | 5.27e-10 | 71 |
paraxial mesoderm | 8.24e-10 | 72 |
presumptive paraxial mesoderm | 8.24e-10 | 72 |
dense mesenchyme tissue | 1.27e-09 | 73 |
blood vessel smooth muscle | 2.87e-08 | 10 |
arterial system smooth muscle | 2.87e-08 | 10 |
artery smooth muscle tissue | 2.87e-08 | 10 |
aorta smooth muscle tissue | 2.87e-08 | 10 |
trunk mesenchyme | 3.43e-08 | 122 |
urothelium | 3.79e-07 | 5 |