FFCP PHASE1:Hg19::chr10:90751002..90751013,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=130 | |||
|TSSclassifier=strong | |||
|UniProt=F6UVQ4 | |||
|association_with_transcript=31bp_to_ENST00000458159_5end | |||
|cluster_id=chr10:90751002..90751013,- | |||
|description=CAGE_peak_7_at_ACTA2_5end | |||
|id=chr10:90751002..90751013,- | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!2.21e-14!75;CL:0000183!4.13e-14!59;CL:0000187!4.71e-13!54;CL:0000680!4.13e-12!57;CL:0000056!4.13e-12!57;CL:0000355!4.13e-12!57;CL:0000393!1.25e-11!60;CL:0000211!1.25e-11!60;CL:0000192!4.36e-10!42;CL:0000514!4.36e-10!42;CL:0002371!5.85e-10!591;CL:0000144!2.82e-09!625;CL:0002321!4.38e-07!248;CL:0000548!5.90e-07!679;CL:0000004!5.90e-07!679;CL:0000255!5.90e-07!679;CL:0000220!6.95e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002363;6.61e-07;2!CL:0002554;8.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.18e-07,55;CL:0002554,4.14e-07,2;CL:0000680,4.35e-07,58;CL:0000056,4.35e-07,58;CL:0000355,4.35e-07,58;CL:0002363,6.99e-07,2;CL:0000008,6.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.61e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.82e-12!143;UBERON:0000914!5.57e-11!83;UBERON:0002329!5.57e-11!83;UBERON:0003077!5.57e-11!83;UBERON:0003059!5.57e-11!83;UBERON:0007282!5.57e-11!83;UBERON:0009618!5.57e-11!83;UBERON:0007285!5.57e-11!83;UBERON:0000486!1.39e-10!82;UBERON:0004290!2.45e-10!70;UBERON:0001134!2.62e-10!61;UBERON:0002036!2.62e-10!61;UBERON:0003082!2.62e-10!61;UBERON:0002385!1.63e-09!63;UBERON:0001015!1.63e-09!63;UBERON:0000383!1.63e-09!63;UBERON:0003102!3.06e-08!95;UBERON:0000475!5.62e-08!365;UBERON:0002100!2.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;4.86e-07;4!UBERON:0000964;4.86e-07;4!UBERON:0010409;4.86e-07;4!UBERON:0003566;6.61e-07;2!UBERON:0001777;6.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.47e-08,122;UBERON:0003891,4.08e-07,4;UBERON:0007503,5.47e-07,78;UBERON:0000964,6.85e-07,4;UBERON:0010409,6.85e-07,4;UBERON:0004348,6.85e-07,4;UBERON:0005427,6.85e-07,4;UBERON:0003566,6.99e-07,2;UBERON:0001777,6.99e-07,2 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0,0,0,0,0,3.15859936713415,0.261185628199839,0.491467873003018,1.39560233594486,0.218441372130172,0.527533956456907,0.247532705920093,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.369363174230364,0.408001382488506,0.313454721478088,0.85870796139317,0,0.125542639594803,0.916960868975415,0.410502947249729,0.550975469195755,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.02290049474824,0.361439152384566,0,0.289693037921647,0,0,0.661743720148475,0.665188192387692,0.43917392846563,0.196468613246569,1.09288586487763,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0.67355336034844,0.817309515567294,1.05950199351452,0.576175924479999,1.64025002283658,0.624320153660641,1.71141546463335,0.896692083310806,0.23486899728753,0,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0,1.82032272387605,2.87447256726495,0.168336113954066,0.250237039743928,0,1.31693286264251,0.30648779579902,0.300476117813194,0.567160915800105,1.4351170855109,0.85422955527427,0.423863802319124,0,0.92747276314595,0.257640540045629,0.558350568994769,0.337552664482532,0.292311015483596,0.252433774244115,0.460249493211497,0.646584227275248,0,0.604512589365842,0.67824236924195,0.193260853163297,0,0.286804595389004,0.121973706129595,0.265059536642971,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0.109750285408626,2.24803506515239,0.100528972411631,0.648119116109707,1.3032332212413,4.15973914111831,1.44331342025273,0.579652024875384,1.29149563659404,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0.205654985406647,0.600686115687835,1.42913216315289,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,3.57656445851882,0,1.06375246633948,0,0.514414748524284,0,0.799266537048298,1.14382394926518,0.542621605391443,0,1.30294473717494,0.355391948742546,0.791951872933429,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.535286966391485,0,0.117141414992713,1.20378439891088,4.5481500811197,0,0,0.737476674166813,1.73767228936166,0.587403472388222,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.384417447767103,0,0.321707842287215,0,1.3878872442239,0.532685175939381,1.06765302817952,1.55776328755086,0.464841513839837,0,1.00253235151642,0.0920809889358963,0.918515585316854,2.36718518408732,1.83574180943194,0,0.616122696835318,0,0,0.316654886678627,0,0.170093705276516,0.647747748306418,0,0.812839312631559,1.50506932156456,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.870036464629098,0,0.15350367472613,0.413509717453592,0.537101224341368,0.580066775656914,0.255679882248303,1.06838442776085,0.661139661443912,0.192190067365106,0.638063562472921,0.4046311234222,0,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,1.73986598415015,0.18532421910392,0.143124886741991,1.116475108079,0,0,2.55897791311334,0.42793898803392,0.95460974377781,1.56989728039846,0.719489830333259,1.09814811894422,0.824686816419805,1.01091240786658,0,0.421258456238981,1.95053495635836,0.487426979262569,0,0.818999468447914,1.83827061539827,0,0.551365343546124,0.66343897524122,0,5.20897980840019,0,1.01455188481352,0,0.845086807596724,0.286822704408103,0.0982490410131212,0.7133421029625,0.709522128141196,0,0,0.379473173765715,0.349934720244983,0.192444225451024,1.34060455107157,1.08890984861323,0,4.73555909938353,0,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.677167111206413,0.1605880751037,0.201799707191048,2.55507742614196,0.343505344755765,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.102268682502155,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,2.96553453471607,2.92381458615275,0.134802265961354,0,0,0,0,0,0,0,0,0,1.9542044523884,1.14057010536972,0,0,0,0,0,0,0,0,0.696473652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| |||
|short_description=p7@ACTA2 | |||
}} |
Latest revision as of 20:50, 19 September 2015
Short description: | p7@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.18e-07 | 55 |
fibroblast of lymphatic vessel | 4.14e-07 | 2 |
muscle precursor cell | 4.35e-07 | 58 |
myoblast | 4.35e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.35e-07 | 58 |
keratocyte | 6.99e-07 | 2 |
migratory cranial neural crest cell | 6.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.47e-08 | 122 |
stroma | 4.08e-07 | 4 |
epithelial vesicle | 5.47e-07 | 78 |
cornea | 6.85e-07 | 4 |
eye surface | 6.85e-07 | 4 |
optic eminence | 6.85e-07 | 4 |
corneal primordium | 6.85e-07 | 4 |
head connective tissue | 6.99e-07 | 2 |
substantia propria of cornea | 6.99e-07 | 2 |