FFCP PHASE1:Hg19::chr5:115910498..115910536,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:115910498..115910536,- to FFCP PHASE1:Hg19::chr5:115910498..115910536,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57556 | |EntrezGene=57556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |HGNC=10738 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2E6 | |UniProt=Q9H2E6 | ||
|association_with_transcript=14bp_to_NM_020796,uc003krx.3,uc010jck.2_5end | |||
|cluster_id=chr5:115910498..115910536,- | |||
|coexpression_cluster_id=C2800 | |||
|description=CAGE_peak_1_at_SEMA6A_5end | |||
|id=chr5:115910498..115910536,- | |||
|ontology_enrichment_celltype=CL:0000148!6.37e-08!10;CL:0000541!6.37e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;6.39e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.44e-09,10;CL:0000541,6.44e-09,10;CL:0000133,3.76e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.02e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.36e-07;22!DOID:2994;2.36e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.75e-07,22;DOID:2994,1.75e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.00e-32!82;UBERON:0007023!2.29e-31!115;UBERON:0005743!6.07e-31!86;UBERON:0000073!1.38e-30!94;UBERON:0001016!1.38e-30!94;UBERON:0001049!1.44e-28!57;UBERON:0005068!1.44e-28!57;UBERON:0006241!1.44e-28!57;UBERON:0007135!1.44e-28!57;UBERON:0000955!7.09e-26!69;UBERON:0006238!7.09e-26!69;UBERON:0002616!1.77e-25!59;UBERON:0000924!5.15e-23!173;UBERON:0006601!5.15e-23!173;UBERON:0002346!9.36e-23!90;UBERON:0004121!4.33e-22!169;UBERON:0003075!6.97e-22!86;UBERON:0007284!6.97e-22!86;UBERON:0003080!1.77e-21!42;UBERON:0002780!5.25e-21!41;UBERON:0001890!5.25e-21!41;UBERON:0006240!5.25e-21!41;UBERON:0000033!1.09e-18!123;UBERON:0000153!1.42e-18!129;UBERON:0007811!1.42e-18!129;UBERON:0002020!8.84e-18!34;UBERON:0003528!8.84e-18!34;UBERON:0001893!1.22e-17!34;UBERON:0002791!3.09e-17!33;UBERON:0001869!1.93e-16!32;UBERON:0004111!6.19e-16!241;UBERON:0003056!8.89e-16!61;UBERON:0000025!7.52e-15!194;UBERON:0000119!2.19e-13!312;UBERON:0000483!2.26e-13!309;UBERON:0000956!4.75e-13!25;UBERON:0000203!4.75e-13!25;UBERON:0000477!1.45e-12!286;UBERON:0000481!4.40e-12!347;UBERON:0000475!6.85e-12!365;UBERON:0002619!7.12e-12!22;UBERON:0000468!4.79e-11!659;UBERON:0001950!6.83e-11!20;UBERON:0000922!8.51e-11!612;UBERON:0000480!8.32e-09!626;UBERON:0000064!1.00e-08!219;UBERON:0000467!1.11e-08!625;UBERON:0002050!1.66e-08!605;UBERON:0005423!1.66e-08!605;UBERON:0000923!2.83e-08!604;UBERON:0005291!2.83e-08!604;UBERON:0006598!2.83e-08!604;UBERON:0002532!2.83e-08!604;UBERON:0000062!3.03e-08!511;UBERON:0003076!3.22e-08!15;UBERON:0003057!3.22e-08!15;UBERON:0004732!3.89e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.69e-17;34!UBERON:0002020;1.69e-17;34!UBERON:0002780;2.00e-17;41!UBERON:0001890;2.00e-17;41!UBERON:0001893;2.38e-17;34!UBERON:0002791;2.67e-17;32!UBERON:0001869;3.92e-17;32!UBERON:0000073;4.34e-17;53!UBERON:0002616;4.34e-17;53!UBERON:0000956;7.66e-15;25!UBERON:0000203;7.66e-15;25!UBERON:0002619;1.73e-13;22!UBERON:0000955;1.27e-12;68!UBERON:0001950;2.35e-12;20!UBERON:0001017;2.98e-12;75!UBERON:0001016;4.51e-12;83!UBERON:0007023;6.57e-11;114!UBERON:0000922;3.92e-10;49!UBERON:0004732;6.15e-08;13!UBERON:0004733;3.37e-07;12!UBERON:0002028;3.37e-07;12!UBERON:0000125;5.86e-07;9!UBERON:0002308;5.86e-07;9 | |||
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| ||
|short_description=p1@SEMA6A | |||
}} | }} |
Latest revision as of 20:49, 19 September 2015
Short description: | p1@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA6A_5end |
Coexpression cluster: | C2800_pineal_teratocarcinoma_hepatoblastoma_optic_testicular_spinal_H9 |
Association with transcript: | 14bp_to_NM_020796, uc003krx.3, uc010jck.2_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | Q9H2E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.44e-09 | 10 |
melanoblast | 6.44e-09 | 10 |
neurectodermal cell | 3.76e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.75e-07 | 22 |
germ cell cancer | 1.75e-07 | 22 |