FFCP PHASE1:Hg19::chr22:31892268..31892278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9814 | |EntrezGene=9814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |HGNC=29064 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8P3 | |UniProt=A8K8P3 | ||
|association_with_transcript=7bp_to_ENST00000414585,ENST00000421060,ENST00000432498,ENST00000443326,ENST00000540643,NM_001007467,NM_014775,uc003ald.1,uc003ale.2,uc003alf.2,uc003alg.2,uc003alh.2,uc011alp.1,uc011alq.1_5end | |association_with_transcript=7bp_to_ENST00000414585,ENST00000421060,ENST00000432498,ENST00000443326,ENST00000540643,NM_001007467,NM_014775,uc003ald.1,uc003ale.2,uc003alf.2,uc003alg.2,uc003alh.2,uc011alp.1,uc011alq.1_5end | ||
|cluster_id=chr22:31892268..31892278,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_SFI1_5end | |description=CAGE_peak_4_at_SFI1_5end | ||
|id=chr22:31892268..31892278,+ | |id=chr22:31892268..31892278,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.13e-50!140;CL:0000037!3.13e-44!172;CL:0000566!3.13e-44!172;CL:0000988!8.80e-43!182;CL:0002031!7.50e-42!124;CL:0002032!1.52e-40!165;CL:0000837!1.52e-40!165;CL:0002087!5.68e-39!119;CL:0000766!1.63e-28!76;CL:0002057!1.61e-26!42;CL:0000860!3.51e-26!45;CL:0000839!7.42e-24!70;CL:0000557!1.28e-23!71;CL:0000763!3.63e-23!112;CL:0000049!3.63e-23!112;CL:0002009!4.72e-22!65;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000542!5.90e-16!53;CL:0000051!5.90e-16!53;CL:0000838!1.01e-15!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000791!3.33e-10!18;CL:0000789!3.33e-10!18;CL:0002420!3.33e-10!18;CL:0002419!3.33e-10!18;CL:0000790!3.33e-10!18;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.59e-07!8 | |ontology_enrichment_celltype=CL:0000738!3.13e-50!140;CL:0000037!3.13e-44!172;CL:0000566!3.13e-44!172;CL:0000988!8.80e-43!182;CL:0002031!7.50e-42!124;CL:0002032!1.52e-40!165;CL:0000837!1.52e-40!165;CL:0002087!5.68e-39!119;CL:0000766!1.63e-28!76;CL:0002057!1.61e-26!42;CL:0000860!3.51e-26!45;CL:0000839!7.42e-24!70;CL:0000557!1.28e-23!71;CL:0000763!3.63e-23!112;CL:0000049!3.63e-23!112;CL:0002009!4.72e-22!65;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000542!5.90e-16!53;CL:0000051!5.90e-16!53;CL:0000838!1.01e-15!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000791!3.33e-10!18;CL:0000789!3.33e-10!18;CL:0002420!3.33e-10!18;CL:0002419!3.33e-10!18;CL:0000790!3.33e-10!18;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.59e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-24;33!CL:0002057;1.49e-24;33!CL:0000576;2.09e-21;48!CL:0000766;2.31e-20;69!CL:0000473;6.13e-19;39!CL:0000234;6.13e-19;39!CL:0002087;6.67e-15;104!CL:0000094;9.78e-15;8!CL:0000084;1.24e-14;25!CL:0000791;5.61e-14;18!CL:0000789;5.61e-14;18!CL:0002419;5.61e-14;18!CL:0000081;4.01e-13;11!CL:0000738;6.09e-13;136!CL:0000624;1.70e-11;6!CL:0000988;3.57e-11;177!CL:0002393;1.07e-10;6!CL:0002397;1.07e-10;6!CL:0000542;5.86e-09;53!CL:0000763;1.67e-08;100!CL:0000840;5.75e-08;5!CL:0000775;3.11e-07;3!CL:0000875;6.86e-07;3!CL:0002396;6.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-67,136;CL:0000988,1.72e-54,177;CL:0002031,1.70e-53,120;CL:0000037,2.09e-53,168;CL:0002087,1.71e-52,115;CL:0002032,8.20e-49,161;CL:0000837,8.20e-49,161;CL:0000766,9.41e-47,72;CL:0000860,9.42e-41,42;CL:0002057,9.42e-41,42;CL:0000473,1.04e-38,48;CL:0000234,1.04e-38,48;CL:0002009,9.89e-38,61;CL:0000557,3.62e-37,67;CL:0000839,2.44e-35,66;CL:0002194,7.96e-35,59;CL:0000576,7.96e-35,59;CL:0000040,7.96e-35,59;CL:0000559,7.96e-35,59;CL:0000763,5.54e-32,108;CL:0000049,5.54e-32,108;CL:0002393,1.04e-15,9;CL:0002397,1.04e-15,9;CL:0000838,4.11e-15,52;CL:0000094,7.15e-15,8;CL:0000084,7.47e-15,25;CL:0000827,7.47e-15,25;CL:0000542,1.09e-14,53;CL:0000051,1.09e-14,53;CL:0000791,4.21e-14,18;CL:0000789,4.21e-14,18;CL:0002420,4.21e-14,18;CL:0002419,4.21e-14,18;CL:0000790,4.21e-14,18;CL:0000134,2.02e-13,354;CL:0000081,3.08e-13,11;CL:0002320,9.44e-13,361;CL:0000624,1.61e-11,6;CL:0000219,2.01e-10,386;CL:0000723,1.51e-08,433;CL:0000048,1.61e-08,427;CL:0000034,1.92e-08,441;CL:0000840,5.90e-08,5;CL:0001029,5.90e-08,5;CL:0000775,3.14e-07,3;CL:0000875,6.18e-07,3;CL:0002396,6.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-28;42!CL:0000790;5.61e-14;18!CL:0000051;5.86e-09;53!CL:0000049;6.16e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-31!102;UBERON:0003061!1.67e-31!102;UBERON:0002193!2.77e-26!112;UBERON:0002371!2.34e-19!80;UBERON:0001474!6.56e-17!86;UBERON:0002405!1.69e-12!115;UBERON:0004765!3.36e-12!101;UBERON:0001434!3.36e-12!101;UBERON:0000178!6.96e-11!15;UBERON:0000179!6.96e-11!15;UBERON:0000463!6.96e-11!15;UBERON:0003081!2.53e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!1.67e-31!102;UBERON:0003061!1.67e-31!102;UBERON:0002193!2.77e-26!112;UBERON:0002371!2.34e-19!80;UBERON:0001474!6.56e-17!86;UBERON:0002405!1.69e-12!115;UBERON:0004765!3.36e-12!101;UBERON:0001434!3.36e-12!101;UBERON:0000178!6.96e-11!15;UBERON:0000179!6.96e-11!15;UBERON:0000463!6.96e-11!15;UBERON:0003081!2.53e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-23;15!UBERON:0000179;1.05e-23;15!UBERON:0000463;1.05e-23;15!UBERON:0002390;4.51e-12;32 | |||
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| ||
|short_description=p4@SFI1 | |short_description=p4@SFI1 | ||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p4@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SFI1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 7bp_to_ENST00000414585, ENST00000421060, ENST00000432498, ENST00000443326, ENST00000540643, NM_001007467, NM_014775, uc003ald.1, uc003ale.2, uc003alf.2, uc003alg.2, uc003alh.2, uc011alp.1, uc011alq.1_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | A8K8P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.07e-55 | 98 |
blood island | 9.07e-55 | 98 |
hemolymphoid system | 9.73e-50 | 108 |
immune system | 1.20e-31 | 93 |
bone marrow | 3.23e-31 | 76 |
bone element | 5.53e-28 | 82 |
skeletal element | 2.36e-24 | 90 |
blood | 3.97e-23 | 15 |
haemolymphatic fluid | 3.97e-23 | 15 |
organism substance | 3.97e-23 | 15 |
skeletal system | 1.18e-20 | 100 |
lateral plate mesoderm | 1.61e-19 | 203 |
connective tissue | 7.64e-12 | 371 |
musculoskeletal system | 6.79e-09 | 167 |
thymus | 6.15e-07 | 4 |
hemolymphoid system gland | 6.15e-07 | 4 |
thymic region | 6.15e-07 | 4 |
pharyngeal gland | 6.15e-07 | 4 |
thymus primordium | 6.15e-07 | 4 |
mesoderm | 9.22e-07 | 315 |
mesoderm-derived structure | 9.22e-07 | 315 |
presumptive mesoderm | 9.22e-07 | 315 |