FFCP PHASE1:Hg19::chr22:31892268..31892278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9814 | |EntrezGene=9814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29064 | |HGNC=29064 | ||
|TSSclassifier=strong | |||
|UniProt=A8K8P3 | |UniProt=A8K8P3 | ||
|association_with_transcript=7bp_to_ENST00000414585,ENST00000421060,ENST00000432498,ENST00000443326,ENST00000540643,NM_001007467,NM_014775,uc003ald.1,uc003ale.2,uc003alf.2,uc003alg.2,uc003alh.2,uc011alp.1,uc011alq.1_5end | |association_with_transcript=7bp_to_ENST00000414585,ENST00000421060,ENST00000432498,ENST00000443326,ENST00000540643,NM_001007467,NM_014775,uc003ald.1,uc003ale.2,uc003alf.2,uc003alg.2,uc003alh.2,uc011alp.1,uc011alq.1_5end | ||
|cluster_id=chr22:31892268..31892278,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_SFI1_5end | |description=CAGE_peak_4_at_SFI1_5end | ||
|id=chr22:31892268..31892278,+ | |id=chr22:31892268..31892278,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.13e-50!140;CL:0000037!3.13e-44!172;CL:0000566!3.13e-44!172;CL:0000988!8.80e-43!182;CL:0002031!7.50e-42!124;CL:0002032!1.52e-40!165;CL:0000837!1.52e-40!165;CL:0002087!5.68e-39!119;CL:0000766!1.63e-28!76;CL:0002057!1.61e-26!42;CL:0000860!3.51e-26!45;CL:0000839!7.42e-24!70;CL:0000557!1.28e-23!71;CL:0000763!3.63e-23!112;CL:0000049!3.63e-23!112;CL:0002009!4.72e-22!65;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000542!5.90e-16!53;CL:0000051!5.90e-16!53;CL:0000838!1.01e-15!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000791!3.33e-10!18;CL:0000789!3.33e-10!18;CL:0002420!3.33e-10!18;CL:0002419!3.33e-10!18;CL:0000790!3.33e-10!18;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.59e-07!8 | |ontology_enrichment_celltype=CL:0000738!3.13e-50!140;CL:0000037!3.13e-44!172;CL:0000566!3.13e-44!172;CL:0000988!8.80e-43!182;CL:0002031!7.50e-42!124;CL:0002032!1.52e-40!165;CL:0000837!1.52e-40!165;CL:0002087!5.68e-39!119;CL:0000766!1.63e-28!76;CL:0002057!1.61e-26!42;CL:0000860!3.51e-26!45;CL:0000839!7.42e-24!70;CL:0000557!1.28e-23!71;CL:0000763!3.63e-23!112;CL:0000049!3.63e-23!112;CL:0002009!4.72e-22!65;CL:0002194!1.03e-20!63;CL:0000576!1.03e-20!63;CL:0000040!1.03e-20!63;CL:0000559!1.03e-20!63;CL:0000542!5.90e-16!53;CL:0000051!5.90e-16!53;CL:0000838!1.01e-15!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000791!3.33e-10!18;CL:0000789!3.33e-10!18;CL:0002420!3.33e-10!18;CL:0002419!3.33e-10!18;CL:0000790!3.33e-10!18;CL:0002393!1.12e-07!9;CL:0002397!1.12e-07!9;CL:0000094!2.59e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-24;33!CL:0002057;1.49e-24;33!CL:0000576;2.09e-21;48!CL:0000766;2.31e-20;69!CL:0000473;6.13e-19;39!CL:0000234;6.13e-19;39!CL:0002087;6.67e-15;104!CL:0000094;9.78e-15;8!CL:0000084;1.24e-14;25!CL:0000791;5.61e-14;18!CL:0000789;5.61e-14;18!CL:0002419;5.61e-14;18!CL:0000081;4.01e-13;11!CL:0000738;6.09e-13;136!CL:0000624;1.70e-11;6!CL:0000988;3.57e-11;177!CL:0002393;1.07e-10;6!CL:0002397;1.07e-10;6!CL:0000542;5.86e-09;53!CL:0000763;1.67e-08;100!CL:0000840;5.75e-08;5!CL:0000775;3.11e-07;3!CL:0000875;6.86e-07;3!CL:0002396;6.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.10e-67,136;CL:0000988,1.72e-54,177;CL:0002031,1.70e-53,120;CL:0000037,2.09e-53,168;CL:0002087,1.71e-52,115;CL:0002032,8.20e-49,161;CL:0000837,8.20e-49,161;CL:0000766,9.41e-47,72;CL:0000860,9.42e-41,42;CL:0002057,9.42e-41,42;CL:0000473,1.04e-38,48;CL:0000234,1.04e-38,48;CL:0002009,9.89e-38,61;CL:0000557,3.62e-37,67;CL:0000839,2.44e-35,66;CL:0002194,7.96e-35,59;CL:0000576,7.96e-35,59;CL:0000040,7.96e-35,59;CL:0000559,7.96e-35,59;CL:0000763,5.54e-32,108;CL:0000049,5.54e-32,108;CL:0002393,1.04e-15,9;CL:0002397,1.04e-15,9;CL:0000838,4.11e-15,52;CL:0000094,7.15e-15,8;CL:0000084,7.47e-15,25;CL:0000827,7.47e-15,25;CL:0000542,1.09e-14,53;CL:0000051,1.09e-14,53;CL:0000791,4.21e-14,18;CL:0000789,4.21e-14,18;CL:0002420,4.21e-14,18;CL:0002419,4.21e-14,18;CL:0000790,4.21e-14,18;CL:0000134,2.02e-13,354;CL:0000081,3.08e-13,11;CL:0002320,9.44e-13,361;CL:0000624,1.61e-11,6;CL:0000219,2.01e-10,386;CL:0000723,1.51e-08,433;CL:0000048,1.61e-08,427;CL:0000034,1.92e-08,441;CL:0000840,5.90e-08,5;CL:0001029,5.90e-08,5;CL:0000775,3.14e-07,3;CL:0000875,6.18e-07,3;CL:0002396,6.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-28;42!CL:0000790;5.61e-14;18!CL:0000051;5.86e-09;53!CL:0000049;6.16e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.67e-31!102;UBERON:0003061!1.67e-31!102;UBERON:0002193!2.77e-26!112;UBERON:0002371!2.34e-19!80;UBERON:0001474!6.56e-17!86;UBERON:0002405!1.69e-12!115;UBERON:0004765!3.36e-12!101;UBERON:0001434!3.36e-12!101;UBERON:0000178!6.96e-11!15;UBERON:0000179!6.96e-11!15;UBERON:0000463!6.96e-11!15;UBERON:0003081!2.53e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-23;15!UBERON:0000179;1.05e-23;15!UBERON:0000463;1.05e-23;15!UBERON:0002390;4.51e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.07e-55,98;UBERON:0003061,9.07e-55,98;UBERON:0002193,9.73e-50,108;UBERON:0002405,1.20e-31,93;UBERON:0002371,3.23e-31,76;UBERON:0001474,5.53e-28,82;UBERON:0004765,2.36e-24,90;UBERON:0000178,3.97e-23,15;UBERON:0000179,3.97e-23,15;UBERON:0000463,3.97e-23,15;UBERON:0001434,1.18e-20,100;UBERON:0003081,1.61e-19,203;UBERON:0002384,7.64e-12,371;UBERON:0002204,6.79e-09,167;UBERON:0002370,6.15e-07,4;UBERON:0005058,6.15e-07,4;UBERON:0009113,6.15e-07,4;UBERON:0003295,6.15e-07,4;UBERON:0005562,6.15e-07,4;UBERON:0000926,9.22e-07,315;UBERON:0004120,9.22e-07,315;UBERON:0006603,9.22e-07,315 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,1.29902789771517,0.738905305049512,1.41679406364623,2.75354993794233,1.15148819429164,1.85779347979291,0.919421224478927,0,0.369754010166788,1.16200800870452,0.568676929949686,0.293600439334847,2.21598163412751,2.4065333696417,2.17010870715852,0,0,0,0.581592955118259,0.377875943688809,2.18325655069035,2.32429036905685,2.46700732813095,4.95530193432166,0.863077176966451,0.512321413058201,2.83778675866302,4.13694816883942,1.93645405075148,1.35426486594342,1.12945403725563,3.27487380069415,3.14612878223118,1.53041946185451,5.1348644332175,8.31138263538754,0.989553900560148,1.19678194572979,0.852449501065388,2.61188314765726,5.6738522469114,1.24564449799115,1.50749199154046,1.5644487552606,2.38907729175628,1.21079900526674,4.78760926783834,4.74693581161327,2.32380814943136,3.18906449947565,2.09658645508376,0.786300418025466,1.65194582125657,0.964353520182481,4.84521664360123,5.17183360717634,3.65328307529268,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,1.70763890732835,1.17447437874188,0.382273228125229,0,1.12101712596307,0,5.31116379307349,3.53709686474248,2.2616164889946,0.83593247695339,4.56291173287027,3.31413464014313,1.94826728407911,1.55974639639243,2.94605907474837,0.664601683750863,2.16643091012012,0.512365278902701,0,1.64437904603676,1.10540007114339,2.60822777161547,3.70716407905151,3.74557159325598,3.1360657141493,0.566546713487831,3.06576394881537,1.71813722741315,2.53019692019503,1.91139248594458,0,0.950452044448374,0.451725357233318,0.76791966692651,2.49861453104692,1.18388626022008,0.821127996921047,3.22570789159572,2.67440195783507,1.30341963494519,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.327447688744282,0,0,3.24547393654683,2.61194605948901,2.39324328933957,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0.0892997282840798,0,0,0,0,0,23.7204751384914,15.511210565933,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0.515281080091258,0,0.337552664482532,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,2.20731549707325,0.368965315629341,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.8720341211139,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,3.4486426652716,0.44024217006613,0.621984346622316,0.864719720501769,1.2624243342638,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,1.2329365839288,1.18218456121156,1.2937654491571,1.41177339907723,0.254094624222463,0,0,0,0,10.4860983352606,11.966458368161,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.24060815673732,1.07857100409308,3.20182673410333,0.606255142892519,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0.601519410909855,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.765676274967505,0.10115778085555,0,0,0.6970372701606,0,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.196498082026242,0.7133421029625,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.01489521846434,1.52927441428475,3.41788312304498,4.76463550915578,2.05681136543097,3.8908398671563,2.16012574895246,2.37937552888281,0,0,0.245040215981032,0.371606350251437,0.865615277858669,0.426851060090485,0.159426272728822,0,0.383010740264733,2.11673582723883,0.324621940274555,0,0.684704037099577,0.313359791546046,0,0.169291777801603,0.1605880751037,0.201799707191048,0.851692475380653,0.343505344755765,0,0.447352215784832,0,0,0,0,0,0.33307196799782,0,0.748562161632879,0,0,1.78309414843965,0,0.47748896947538,0,0.307160702099232,0,0.281338832821026,0.111308705022906,0,0.211125408127993,0.19924798825107,1.38141957765574,0.251932747854276,0,1.35393286007176,0,0,0.179021174675609,0,0,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0.962059999958153,0.724999575434793,0,0.254253650292766,1.18193840883968,0,0,0,0,0.482385754501632,0,0.442317039724898,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.089757644409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| ||
|short_description=p4@SFI1 | |short_description=p4@SFI1 | ||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p4@SFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SFI1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 7bp_to_ENST00000414585, ENST00000421060, ENST00000432498, ENST00000443326, ENST00000540643, NM_001007467, NM_014775, uc003ald.1, uc003ale.2, uc003alf.2, uc003alg.2, uc003alh.2, uc011alp.1, uc011alq.1_5end |
EntrezGene: | SFI1 |
HGNC: | 29064 |
UniProt: | A8K8P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.07e-55 | 98 |
blood island | 9.07e-55 | 98 |
hemolymphoid system | 9.73e-50 | 108 |
immune system | 1.20e-31 | 93 |
bone marrow | 3.23e-31 | 76 |
bone element | 5.53e-28 | 82 |
skeletal element | 2.36e-24 | 90 |
blood | 3.97e-23 | 15 |
haemolymphatic fluid | 3.97e-23 | 15 |
organism substance | 3.97e-23 | 15 |
skeletal system | 1.18e-20 | 100 |
lateral plate mesoderm | 1.61e-19 | 203 |
connective tissue | 7.64e-12 | 371 |
musculoskeletal system | 6.79e-09 | 167 |
thymus | 6.15e-07 | 4 |
hemolymphoid system gland | 6.15e-07 | 4 |
thymic region | 6.15e-07 | 4 |
pharyngeal gland | 6.15e-07 | 4 |
thymus primordium | 6.15e-07 | 4 |
mesoderm | 9.22e-07 | 315 |
mesoderm-derived structure | 9.22e-07 | 315 |
presumptive mesoderm | 9.22e-07 | 315 |