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FFCP PHASE1:Hg19::chr1:202431836..202431849,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=4660
|EntrezGene=4660
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7619
|HGNC=7619
|TSSclassifier=strong
|UniProt=O60237
|UniProt=O60237
|association_with_transcript=-21bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end
|association_with_transcript=-21bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end
|cluster_id=chr1:202431836..202431849,+
|coexpression_cluster_id=C20
|description=CAGE_peak_18_at_PPP1R12B_5end
|description=CAGE_peak_18_at_PPP1R12B_5end
|id=chr1:202431836..202431849,+
|id=chr1:202431836..202431849,+
|ontology_enrichment_celltype=CL:0002274!1.56e-44!5;CL:0000457!1.56e-44!5;CL:0002191!1.56e-44!5;CL:0000097!1.56e-44!5;CL:0000831!1.56e-44!5;CL:0002028!1.56e-44!5;CL:0000163!3.74e-25!9;CL:0000151!5.53e-07!35
|ontology_enrichment_celltype=CL:0002274!1.56e-44!5;CL:0000457!1.56e-44!5;CL:0002191!1.56e-44!5;CL:0000097!1.56e-44!5;CL:0000831!1.56e-44!5;CL:0002028!1.56e-44!5;CL:0000163!3.74e-25!9;CL:0000151!5.53e-07!35
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0010226;2.39e-66;1
|ontology_enrichment_disease=DOID:114!1.14e-50!2;DOID:178!3.58e-26!1;DOID:326!3.58e-26!1;DOID:3978!3.58e-26!1;DOID:3394!3.58e-26!1;DOID:5844!3.58e-26!1;DOID:1287!5.94e-26!4
|ontology_enrichment_disease_v019=DOID:114;8.99e-131;2!DOID:1287;3.35e-66;4!DOID:178;4.66e-66;1!DOID:326;4.66e-66;1!DOID:3978;4.66e-66;1!DOID:3394;4.66e-66;1!DOID:5844;4.66e-66;1!DOID:7;2.51e-07;39
|ontology_enrichment_disease_v019_2=DOID:114,8.99e-131,2;DOID:1287,3.35e-66,4;DOID:178,4.66e-66,1;DOID:326,4.66e-66,1;DOID:3978,4.66e-66,1;DOID:3394,4.66e-66,1;DOID:5844,4.66e-66,1;DOID:7,6.83e-08,39
|ontology_enrichment_uberon=UBERON:0002084!2.78e-26!1;UBERON:0002082!2.78e-26!1;UBERON:0004706!2.78e-26!1;UBERON:0007029!4.61e-26!1;UBERON:0004151!1.10e-09!3;UBERON:0002300!1.10e-09!3;UBERON:0002240!1.54e-09!3;UBERON:0007100!4.87e-09!27;UBERON:0000014!1.59e-07!4
|ontology_enrichment_uberon_v019=UBERON:0002084;2.39e-66;1!UBERON:0002082;2.39e-66;1!UBERON:0007100;1.10e-24;25!UBERON:0004151;3.27e-23;3
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.39e-66,1;UBERON:0002082,2.39e-66,1;UBERON:0010226,2.39e-66,1;UBERON:0004151,3.27e-23,3;UBERON:0007100,5.98e-23,27;UBERON:0003103,8.58e-10,68
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9775300349294,31.7627275621062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5660233480395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p18@PPP1R12B
|short_description=p18@PPP1R12B
}}
}}

Latest revision as of 20:31, 19 September 2015

Short description:p18@PPP1R12B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_18_at_PPP1R12B_5end
Coexpression cluster:C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat
Association with transcript: -21bp_to_ENST00000290419, ENST00000367270, ENST00000391959, ENST00000491336, NM_032103, NM_032104, uc001gyb.1, uc001gyc.1_5end
EntrezGene:PPP1R12B
HGNC: 7619
UniProt: O60237
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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