FFCP PHASE1:Hg19::chr1:92949195..92949210,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:92949195..92949210,-
|short_description=p7@GFI1
|description=CAGE_peak_7_at_GFI1_5end
|association_with_transcript=-107bp_to_BC074866,BC074867_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2672 | |EntrezGene=2672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4237 | |HGNC=4237 | ||
|TSSclassifier=strong | |||
|UniProt=Q99684 | |UniProt=Q99684 | ||
|association_with_transcript=-107bp_to_BC074866,BC074867_5end | |||
|cluster_id=chr1:92949195..92949210,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_7_at_GFI1_5end | |||
|id=chr1:92949195..92949210,- | |||
|ontology_enrichment_celltype=CL:0000037!2.84e-11!172;CL:0000566!2.84e-11!172;CL:0000988!5.41e-11!182;CL:0002032!3.32e-10!165;CL:0000837!3.32e-10!165;CL:0000784!5.63e-10!3;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000242!1.68e-07!2;CL:0000738!5.92e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.53e-27;3!CL:0000123;3.13e-19;2!CL:0000242;3.13e-19;2!CL:0000312;3.13e-08;5!CL:0000451;1.00e-07;10!CL:0000240;5.42e-07;6!CL:0000311;5.42e-07;6!CL:0000079;5.42e-07;6!CL:0000237;5.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.34e-26,3;CL:0000242,3.13e-19,2;CL:0000312,3.13e-08,5;CL:0000451,1.16e-07,10;CL:0000240,5.42e-07,6;CL:0000311,5.42e-07,6;CL:0000079,5.42e-07,6;CL:0000237,5.42e-07,6;CL:0000036,5.42e-07,6;CL:0000357,5.42e-07,6;CL:0000114,5.42e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;5.42e-07;6!CL:0000114;5.42e-07;6 | |||
|ontology_enrichment_disease=DOID:1240!2.23e-11!39;DOID:8692!4.66e-11!31;DOID:2531!2.06e-10!51;DOID:0060083!2.06e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.99e-13;31!DOID:1240;1.26e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.35e-13,31;DOID:1240,3.52e-10,39;DOID:2531,1.32e-07,51;DOID:0060083,1.32e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.31e-07!4;UBERON:0005058!3.31e-07!4;UBERON:0009113!3.31e-07!4;UBERON:0003295!3.31e-07!4;UBERON:0005562!3.31e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.33e-18;2!UBERON:0005058;5.33e-18;2!UBERON:0009113;5.33e-18;2!UBERON:0004177;9.54e-08;5!UBERON:0005057;9.54e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.59e-09,4;UBERON:0005058,1.59e-09,4;UBERON:0009113,1.59e-09,4;UBERON:0003295,1.59e-09,4;UBERON:0005562,1.59e-09,4 | |||
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| ||
|short_description=p7@GFI1 | |||
}} | }} |
Latest revision as of 20:26, 19 September 2015
Short description: | p7@GFI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GFI1_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -107bp_to_BC074866, BC074867_5end |
EntrezGene: | GFI1 |
HGNC: | 4237 |
UniProt: | Q99684 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.34e-26 | 3 |
Merkel cell | 3.13e-19 | 2 |
keratinocyte | 3.13e-08 | 5 |
dendritic cell | 1.16e-07 | 10 |
stratified squamous epithelial cell | 5.42e-07 | 6 |
keratin accumulating cell | 5.42e-07 | 6 |
stratified epithelial cell | 5.42e-07 | 6 |
keratinizing barrier epithelial cell | 5.42e-07 | 6 |
epithelial fate stem cell | 5.42e-07 | 6 |
stratified epithelial stem cell | 5.42e-07 | 6 |
surface ectodermal cell | 5.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.59e-09 | 4 |
hemolymphoid system gland | 1.59e-09 | 4 |
thymic region | 1.59e-09 | 4 |
pharyngeal gland | 1.59e-09 | 4 |
thymus primordium | 1.59e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.35e-13 | 31 |
leukemia | 3.52e-10 | 39 |
hematologic cancer | 1.32e-07 | 51 |
immune system cancer | 1.32e-07 | 51 |