FFCP PHASE1:Hg19::chr5:115626749..115626788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51397 | |EntrezGene=51397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30201 | |HGNC=30201 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-447bp_to_ENST00000508250_5end | |association_with_transcript=-447bp_to_ENST00000508250_5end | ||
|cluster_id=chr5:115626749..115626788,+ | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_6_at_COMMD10_5end | |description=CAGE_peak_6_at_COMMD10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002602!1.50e-08!2 | |ontology_enrichment_celltype=CL:0002602!1.50e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002569;9.07e-18;6!CL:0002092;2.73e-11;10!CL:0000081;2.37e-10;11 | |ontology_enrichment_celltype_v019=CL:0002569;9.07e-18;6!CL:0002092;2.73e-11;10!CL:0000081;2.37e-10;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002569,9.07e-18,6;CL:0002092,2.73e-11,10;CL:0000081,2.37e-10,11 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4960!5.56e-16!1;DOID:0070004!5.56e-16!1;DOID:3112!2.06e-15!1 | |ontology_enrichment_disease=DOID:4960!5.56e-16!1;DOID:0070004!5.56e-16!1;DOID:3112!2.06e-15!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;9.37e-99;1!DOID:0070004;9.37e-99;1 | |ontology_enrichment_disease_v019=DOID:4960;9.37e-99;1!DOID:0070004;9.37e-99;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,9.37e-99,1;DOID:0070004,9.37e-99,1 | |||
|ontology_enrichment_uberon=UBERON:0009568!1.50e-08!2;UBERON:0002216!1.50e-08!2;UBERON:0002209!1.50e-08!2;UBERON:0002213!1.50e-08!2;UBERON:0004267!1.50e-08!2;UBERON:0006444!1.50e-08!2;UBERON:0001995!1.50e-08!2;UBERON:0004715!1.50e-08!2;UBERON:0001468!1.50e-08!2;UBERON:0001130!1.50e-08!2;UBERON:0001066!1.50e-08!2;UBERON:0000341!1.61e-08!2 | |ontology_enrichment_uberon=UBERON:0009568!1.50e-08!2;UBERON:0002216!1.50e-08!2;UBERON:0002209!1.50e-08!2;UBERON:0002213!1.50e-08!2;UBERON:0004267!1.50e-08!2;UBERON:0006444!1.50e-08!2;UBERON:0001995!1.50e-08!2;UBERON:0004715!1.50e-08!2;UBERON:0001468!1.50e-08!2;UBERON:0001130!1.50e-08!2;UBERON:0001066!1.50e-08!2;UBERON:0000341!1.61e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0002371;1.22e-09;12!UBERON:0001474;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0003422;9.07e-18;6!UBERON:0003104;1.91e-15;7!UBERON:0009142;1.91e-15;7!UBERON:0002331;3.02e-11;10!UBERON:0002371;1.22e-09;12!UBERON:0001474;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,9.07e-18,6;UBERON:0002331,3.02e-11,10;UBERON:0000358,3.02e-11,10;UBERON:0000307,3.02e-11,10;UBERON:0000091,3.02e-11,10;UBERON:0000087,3.02e-11,10;UBERON:0007010,3.02e-11,10;UBERON:0007806,3.02e-11,10;UBERON:0008780,3.02e-11,10;UBERON:0005728,3.02e-11,10 | |||
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|short_description=p6@COMMD10 | |short_description=p6@COMMD10 | ||
}} | }} |
Latest revision as of 20:26, 19 September 2015
Short description: | p6@COMMD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COMMD10_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -447bp_to_ENST00000508250_5end |
EntrezGene: | COMMD10 |
HGNC: | 30201 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 9.07e-18 | 6 |
bone marrow cell | 2.73e-11 | 10 |
blood cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 9.07e-18 | 6 |
umbilical cord | 3.02e-11 | 10 |
blastocyst | 3.02e-11 | 10 |
blastula | 3.02e-11 | 10 |
bilaminar disc | 3.02e-11 | 10 |
inner cell mass | 3.02e-11 | 10 |
cleaving embryo | 3.02e-11 | 10 |
connecting stalk | 3.02e-11 | 10 |
inner cell mass derived epiblast | 3.02e-11 | 10 |
extraembryonic mesoderm | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 9.37e-99 | 1 |
myeloma | 9.37e-99 | 1 |