FFCP PHASE1:Hg19::chrX:147062877..147062885,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158521 | |EntrezGene=158521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26372 | |HGNC=26372 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0W7 | |UniProt=Q8N0W7 | ||
|association_with_transcript=28bp_to_ENST00000370467,NM_152578,uc004fcm.2_5end | |association_with_transcript=28bp_to_ENST00000370467,NM_152578,uc004fcm.2_5end | ||
|cluster_id=chrX:147062877..147062885,+ | |||
|coexpression_cluster_id=C2268 | |||
|description=CAGE_peak_2_at_FMR1NB_5end | |description=CAGE_peak_2_at_FMR1NB_5end | ||
|id=chrX:147062877..147062885,+ | |id=chrX:147062877..147062885,+ | ||
|ontology_enrichment_celltype=CL:1000415!2.72e-10!2;CL:0000322!1.93e-07!3 | |ontology_enrichment_celltype=CL:1000415!2.72e-10!2;CL:0000322!1.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.40e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.46e-17;10!UBERON:0005564;8.46e-17;10 | |||
|ontology_enrichment_disease=DOID:1036!1.02e-20!8;DOID:3910!1.57e-10!2 | |ontology_enrichment_disease=DOID:1036!1.02e-20!8;DOID:3910!1.57e-10!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.81e-21,2;DOID:3908,2.74e-09,5;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.77e-21!8;UBERON:0001282!8.95e-20!1;UBERON:0009842!8.95e-20!1;UBERON:0003704!8.95e-20!1;UBERON:0001171!8.95e-20!1;UBERON:0001172!8.95e-20!1;UBERON:0003135!2.15e-15!11;UBERON:0002294!2.30e-11!7;UBERON:0001173!2.30e-11!7;UBERON:0004912!2.30e-11!7;UBERON:0004903!1.57e-10!2;UBERON:0002173!1.57e-10!2;UBERON:0002186!1.57e-10!2;UBERON:0000991!2.33e-08!21;UBERON:0009196!2.33e-08!21;UBERON:0009117!2.33e-08!21;UBERON:0005564!2.33e-08!21;UBERON:0004176!5.26e-08!22;UBERON:0003101!5.26e-08!22;UBERON:0000079!5.26e-08!22;UBERON:0004821!1.93e-07!3;UBERON:0003215!1.93e-07!3;UBERON:0002299!1.93e-07!3;UBERON:0006524!1.93e-07!3;UBERON:0008874!1.93e-07!3;UBERON:0002169!1.93e-07!3;UBERON:0004894!1.93e-07!3;UBERON:0002110!2.79e-07!3;UBERON:0006242!2.79e-07!3 | |ontology_enrichment_uberon=UBERON:0000473!6.77e-21!8;UBERON:0001282!8.95e-20!1;UBERON:0009842!8.95e-20!1;UBERON:0003704!8.95e-20!1;UBERON:0001171!8.95e-20!1;UBERON:0001172!8.95e-20!1;UBERON:0003135!2.15e-15!11;UBERON:0002294!2.30e-11!7;UBERON:0001173!2.30e-11!7;UBERON:0004912!2.30e-11!7;UBERON:0004903!1.57e-10!2;UBERON:0002173!1.57e-10!2;UBERON:0002186!1.57e-10!2;UBERON:0000991!2.33e-08!21;UBERON:0009196!2.33e-08!21;UBERON:0009117!2.33e-08!21;UBERON:0005564!2.33e-08!21;UBERON:0004176!5.26e-08!22;UBERON:0003101!5.26e-08!22;UBERON:0000079!5.26e-08!22;UBERON:0004821!1.93e-07!3;UBERON:0003215!1.93e-07!3;UBERON:0002299!1.93e-07!3;UBERON:0006524!1.93e-07!3;UBERON:0008874!1.93e-07!3;UBERON:0002169!1.93e-07!3;UBERON:0004894!1.93e-07!3;UBERON:0002110!2.79e-07!3;UBERON:0006242!2.79e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;8.10e-41;1!UBERON:0009842;8.10e-41;1!UBERON:0003704;8.10e-41;1!UBERON:0001171;8.10e-41;1!UBERON:0001172;8.10e-41;1!UBERON:0004903;3.44e-21;2!UBERON:0002173;3.44e-21;2!UBERON:0002186;3.44e-21;2!UBERON:0000473;1.04e-20;8!UBERON:0000058;5.90e-17;10!UBERON:0003135;2.25e-15;11!UBERON:0004821;1.31e-14;3!UBERON:0007499;1.31e-14;3!UBERON:0003215;1.31e-14;3!UBERON:0010368;1.31e-14;3!UBERON:0009911;1.31e-14;3!UBERON:0002299;1.31e-14;3!UBERON:0001280;1.31e-14;3!UBERON:0004647;1.31e-14;3!UBERON:0006524;1.31e-14;3!UBERON:0008874;1.31e-14;3!UBERON:0002169;1.31e-14;3!UBERON:0004894;1.31e-14;3!UBERON:0002394;2.66e-11;4!UBERON:0003928;2.66e-11;4!UBERON:0009856;2.66e-11;4!UBERON:0000991;1.50e-08;21!UBERON:0003101;3.32e-08;22!UBERON:0000079;3.32e-08;22!UBERON:0002294;5.23e-07;7!UBERON:0001173;5.23e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.62e-41,1;UBERON:0009842,6.62e-41,1;UBERON:0003704,6.62e-41,1;UBERON:0001171,6.62e-41,1;UBERON:0001172,6.62e-41,1;UBERON:0004903,3.81e-21,2;UBERON:0002173,3.81e-21,2;UBERON:0002186,3.81e-21,2;UBERON:0000473,1.10e-20,8;UBERON:0003135,2.33e-15,11;UBERON:0001280,1.22e-14,3;UBERON:0004647,1.22e-14,3;UBERON:0005171,1.22e-14,3;UBERON:0004821,1.40e-14,3;UBERON:0003215,1.40e-14,3;UBERON:0010368,1.40e-14,3;UBERON:0009911,1.40e-14,3;UBERON:0002299,1.40e-14,3;UBERON:0006524,1.40e-14,3;UBERON:0008874,1.40e-14,3;UBERON:0002169,1.40e-14,3;UBERON:0004894,1.40e-14,3;UBERON:0000058,1.99e-09,19;UBERON:0000991,1.53e-08,21;UBERON:0009196,1.53e-08,21;UBERON:0009117,1.53e-08,21;UBERON:0005564,1.53e-08,21;UBERON:0004176,3.39e-08,22;UBERON:0003101,3.39e-08,22;UBERON:0000079,3.39e-08,22;UBERON:0002394,5.54e-08,6;UBERON:0003928,5.54e-08,6;UBERON:0007499,2.14e-07,25;UBERON:0009856,3.78e-07,26 | |||
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|short_description=p2@FMR1NB | |short_description=p2@FMR1NB | ||
}} | }} |
Latest revision as of 20:26, 19 September 2015
Short description: | p2@FMR1NB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FMR1NB_5end |
Coexpression cluster: | C2268_cholangiocellular_testis_bronchioalveolar_gall_squamous_chronic_gastric |
Association with transcript: | 28bp_to_ENST00000370467, NM_152578, uc004fcm.2_5end |
EntrezGene: | FMR1NB |
HGNC: | 26372 |
UniProt: | Q8N0W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.62e-41 | 1 |
acinus | 6.62e-41 | 1 |
intrahepatic bile duct | 6.62e-41 | 1 |
portal lobule | 6.62e-41 | 1 |
hepatic acinus | 6.62e-41 | 1 |
bronchoalveolar duct junction | 3.81e-21 | 2 |
alveolar duct | 3.81e-21 | 2 |
bronchiole | 3.81e-21 | 2 |
testis | 1.10e-20 | 8 |
male reproductive organ | 2.33e-15 | 11 |
liver parenchyma | 1.22e-14 | 3 |
liver lobule | 1.22e-14 | 3 |
hepatic duct | 1.22e-14 | 3 |
pulmonary alveolus epithelium | 1.40e-14 | 3 |
alveolus | 1.40e-14 | 3 |
pulmonary lobule | 1.40e-14 | 3 |
lobule | 1.40e-14 | 3 |
alveolus of lung | 1.40e-14 | 3 |
alveolar system | 1.40e-14 | 3 |
pulmonary acinus | 1.40e-14 | 3 |
alveolar sac | 1.40e-14 | 3 |
alveolar wall | 1.40e-14 | 3 |
duct | 1.99e-09 | 19 |
gonad | 1.53e-08 | 21 |
indifferent external genitalia | 1.53e-08 | 21 |
indifferent gonad | 1.53e-08 | 21 |
gonad primordium | 1.53e-08 | 21 |
external genitalia | 3.39e-08 | 22 |
male organism | 3.39e-08 | 22 |
male reproductive system | 3.39e-08 | 22 |
bile duct | 5.54e-08 | 6 |
digestive system duct | 5.54e-08 | 6 |
epithelial sac | 2.14e-07 | 25 |
sac | 3.78e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.81e-21 | 2 |
non-small cell lung carcinoma | 2.74e-09 | 5 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |