FFCP PHASE1:Hg19::chr2:209119831..209119842,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000481557_5end | |||
|cluster_id=chr2:209119831..209119842,- | |||
|description=CAGE_peak_3_at_IDH1_5end | |||
|id=chr2:209119831..209119842,- | |||
|ontology_enrichment_celltype=CL:0000066!7.15e-08!254;CL:0000055!2.98e-07!180;CL:0002321!5.08e-07!248;CL:0000220!9.09e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.56e-08,253;CL:0002321,5.73e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.00e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.03e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.27e-08!155;UBERON:0001555!5.27e-08!155;UBERON:0007026!5.27e-08!155;UBERON:0004119!1.10e-07!169;UBERON:0000925!1.10e-07!169;UBERON:0006595!1.10e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.45e-08,145;UBERON:0001555,8.45e-08,145;UBERON:0007026,8.45e-08,145;UBERON:0004119,2.32e-07,160;UBERON:0000925,2.32e-07,160;UBERON:0006595,2.32e-07,160 | |||
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| |||
|short_description=p3@IDH1 | |||
}} |
Latest revision as of 20:20, 19 September 2015
Short description: | p3@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481557_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.56e-08 | 253 |
embryonic cell | 5.73e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
digestive system | 8.45e-08 | 145 |
digestive tract | 8.45e-08 | 145 |
primitive gut | 8.45e-08 | 145 |
endoderm-derived structure | 2.32e-07 | 160 |
endoderm | 2.32e-07 | 160 |
presumptive endoderm | 2.32e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.03e-08 | 143 |